RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 EOMESO95936 686 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 SLC35E2BP0CK96 405 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 MYL4P12829 197 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 PAMP19021 973 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 GABRB3P28472 473 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 ACLYP53396 1101 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 MLLT6P55198 1093 aaPredicted RBP12.53□□□□□ -0.4
UBA3-203ENST00000415609 TBX4P57082 545 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 DSC1Q08554 894 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 SLC12A1Q13621 1099 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 NAA25Q14CX7 972 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 NFE2Q16621 373 aaPredicted RBP12.53□□□□□ -0.4
UBA3-203ENST00000415609 ZYG11AQ6WRX3 759 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 RNF180Q86T96 592 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 CNTN4Q8IWV2 1026 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 COLGALT2Q8IYK4 626 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 RDH11Q8TC12 318 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 DTX3LQ8TDB6 740 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 PTCD2Q8WV60 388 aaKnown RBP12.53□□□□□ -0.4
UBA3-203ENST00000415609 KCTD4Q8WVF5 259 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 MRGPRX2Q96LB1 330 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 GATA5Q9BWX5 397 aaPredicted RBP12.53□□□□□ -0.4
UBA3-203ENST00000415609 C1QTNF1Q9BXJ1 281 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 TRPV6Q9H1D0 765 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 FBXO44Q9H4M3 255 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 YY1AP1Q9H869 796 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 COG4Q9H9E3 785 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 TBC1D13Q9NVG8 400 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 OXSMQ9NWU1 459 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 GMIPQ9P107 970 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 DNAJB4Q9UDY4 337 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 TLL2Q9Y6L7 1015 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 THSD7BQ9C0I4 1608 aa12.53□□□□□ -0.4
UBA3-203ENST00000415609 FAM95CA0A1B0GW59 222 aa12.52□□□□□ -0.4
UBA3-203ENST00000415609 TADA2AO75478 443 aa12.52□□□□□ -0.4
UBA3-203ENST00000415609 SLC2A3P11169 496 aa12.52□□□□□ -0.4
UBA3-203ENST00000415609 SLC1A2P43004 574 aa12.52□□□□□ -0.4
UBA3-203ENST00000415609 COPAP53621 1224 aa12.52□□□□□ -0.4
UBA3-203ENST00000415609 TTC3P53804 2025 aa12.52□□□□□ -0.4
UBA3-203ENST00000415609 USP46P62068 366 aa12.52□□□□□ -0.4
UBA3-203ENST00000415609 NRG1Q02297 640 aaPredicted RBP12.52□□□□□ -0.4
UBA3-203ENST00000415609 ITKQ08881 620 aa12.52□□□□□ -0.4
UBA3-203ENST00000415609 EFEMP1Q12805 493 aa12.52□□□□□ -0.4
UBA3-203ENST00000415609 ZNF460Q14592 562 aa12.52□□□□□ -0.4
UBA3-203ENST00000415609 CNGA3Q16281 694 aa12.52□□□□□ -0.4
UBA3-203ENST00000415609 TSNAXIP1Q2TAA8 658 aa12.52□□□□□ -0.4
UBA3-203ENST00000415609 FNDC1Q4ZHG4 1894 aaPredicted RBP12.52□□□□□ -0.4
UBA3-203ENST00000415609 ZNF470Q6ECI4 717 aa12.52□□□□□ -0.4
UBA3-203ENST00000415609 NET1Q7Z628 596 aaPredicted RBP12.52□□□□□ -0.4
UBA3-203ENST00000415609 ZNF354CQ86Y25 554 aa12.52□□□□□ -0.4
UBA3-203ENST00000415609 LRRC49Q8IUZ0 686 aa12.52□□□□□ -0.4
UBA3-203ENST00000415609 CCDC117Q8IWD4 279 aaPredicted RBP12.52□□□□□ -0.4
UBA3-203ENST00000415609 ARHGAP18Q8N392 663 aa12.52□□□□□ -0.4
UBA3-203ENST00000415609 SLC25A41Q8N5S1 370 aa12.52□□□□□ -0.4
UBA3-203ENST00000415609 GPR152Q8TDT2 470 aa12.52□□□□□ -0.4
UBA3-203ENST00000415609 LINC01599Q8WXQ3 324 aa12.52□□□□□ -0.4
UBA3-203ENST00000415609 NAF1Q96HR8 494 aaKnown RBP12.52□□□□□ -0.4
UBA3-203ENST00000415609 FUBP3Q96I24 572 aaKnown RBP eCLIP12.52□□□□□ -0.4
UBA3-203ENST00000415609 C8orf48Q96LL4 319 aa12.52□□□□□ -0.4
UBA3-203ENST00000415609 FTHL17Q9BXU8 183 aa12.52□□□□□ -0.4
UBA3-203ENST00000415609 UBE2OQ9C0C9 1292 aaKnown RBP12.52□□□□□ -0.4
UBA3-203ENST00000415609 C1orf21Q9H246 121 aa12.52□□□□□ -0.4
UBA3-203ENST00000415609 MRM3Q9HC36 420 aaKnown RBP12.52□□□□□ -0.4
UBA3-203ENST00000415609 ACSS2Q9NR19 701 aa12.52□□□□□ -0.4
UBA3-203ENST00000415609 RUVBL2Q9Y230 463 aaKnown RBP12.52□□□□□ -0.4
UBA3-203ENST00000415609 PCDHB5Q9Y5E4 795 aa12.52□□□□□ -0.4
UBA3-203ENST00000415609 TMEM189-UBE2V1I3L0A0 370 aa12.52□□□□□ -0.41
UBA3-203ENST00000415609 CABYRO75952 493 aa12.52□□□□□ -0.41
UBA3-203ENST00000415609 STMN1P16949 149 aa12.52□□□□□ -0.41
UBA3-203ENST00000415609 MPSTP25325 297 aa12.52□□□□□ -0.41
UBA3-203ENST00000415609 ARNTP27540 789 aa12.52□□□□□ -0.41
UBA3-203ENST00000415609 GRIA4P48058 902 aa12.52□□□□□ -0.41
UBA3-203ENST00000415609 ARCN1P48444 511 aaKnown RBP12.52□□□□□ -0.41
UBA3-203ENST00000415609 CSRP3P50461 194 aa12.52□□□□□ -0.41
UBA3-203ENST00000415609 WNT3AP56704 352 aa12.52□□□□□ -0.41
UBA3-203ENST00000415609 RAB10P61026 200 aa12.52□□□□□ -0.41
UBA3-203ENST00000415609 CAP1Q01518 475 aa12.52□□□□□ -0.41
UBA3-203ENST00000415609 MUM1Q2TAK8 710 aa12.52□□□□□ -0.41
UBA3-203ENST00000415609 TRMT5Q32P41 509 aaKnown RBP12.52□□□□□ -0.41
UBA3-203ENST00000415609 VARS2Q5ST30 1063 aaKnown RBP12.52□□□□□ -0.41
UBA3-203ENST00000415609 LIPMQ5VYY2 423 aa12.52□□□□□ -0.41
UBA3-203ENST00000415609 TRIM68Q6AZZ1 485 aa12.52□□□□□ -0.41
UBA3-203ENST00000415609 LRRC8EQ6NSJ5 796 aa12.52□□□□□ -0.41
UBA3-203ENST00000415609 MSANTD2Q6P1R3 559 aa12.52□□□□□ -0.41
UBA3-203ENST00000415609 EPGNQ6UW88 154 aa12.52□□□□□ -0.41
UBA3-203ENST00000415609 RIPOR1Q6ZS17 1223 aa12.52□□□□□ -0.41
UBA3-203ENST00000415609 CFAP61Q8NHU2 1237 aa12.52□□□□□ -0.41
UBA3-203ENST00000415609 SLC39A13Q96H72 371 aa12.52□□□□□ -0.41
UBA3-203ENST00000415609 ELMO2Q96JJ3 720 aa12.52□□□□□ -0.41
UBA3-203ENST00000415609 C1orf74Q96LT6 269 aa12.52□□□□□ -0.41
UBA3-203ENST00000415609 MYCBPQ99417 103 aaPredicted RBP12.52□□□□□ -0.41
UBA3-203ENST00000415609 SHCBP1LQ9BZQ2 653 aa12.52□□□□□ -0.41
UBA3-203ENST00000415609 ZYG11BQ9C0D3 744 aa12.52□□□□□ -0.41
UBA3-203ENST00000415609 ILKAPQ9H0C8 392 aaPredicted RBP12.52□□□□□ -0.41
UBA3-203ENST00000415609 NOL6Q9H6R4 1146 aaKnown RBP12.52□□□□□ -0.41
UBA3-203ENST00000415609 NT5MQ9NPB1 228 aa12.52□□□□□ -0.41
UBA3-203ENST00000415609 MAN1C1Q9NR34 630 aa12.52□□□□□ -0.41
UBA3-203ENST00000415609 ACOT9Q9Y305 439 aa12.52□□□□□ -0.41
UBA3-203ENST00000415609 PLXNA3P51805 1871 aa12.51□□□□□ -0.41
UBA3-203ENST00000415609 CASP8AP2Q9UKL3 1982 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms