RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 A0A087WV62 115 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 GAGE12JA6NER3 117 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 MBD3L5A6NJ08 208 aaPredicted RBP4□□□□□ -1.77
HMGB3P23-201ENST00000414981 FOXO6A8MYZ6 492 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 KIF28PB7ZC32 967 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 MCIDASD6RGH6 385 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 RHODO00212 210 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 HMMRO75330 724 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 BAIAP3O94812 1187 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 NFATC1O95644 943 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 MBD3O95983 291 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 TKTP29401 623 aaKnown RBP4□□□□□ -1.77
HMGB3P23-201ENST00000414981 OAS2P29728 719 aaKnown RBP4□□□□□ -1.77
HMGB3P23-201ENST00000414981 PEX19P40855 299 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 MCM2P49736 904 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 THBS3P49746 956 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 PGGT1BP53609 377 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 EIF5P55010 431 aaKnown RBP4□□□□□ -1.77
HMGB3P23-201ENST00000414981 NUCB1Q02818 461 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 SF3A3Q12874 501 aaKnown RBP eCLIP4□□□□□ -1.77
HMGB3P23-201ENST00000414981 PTGR1Q14914 329 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 ZACNQ401N2 412 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 FAM133BQ5BKY9 247 aaKnown RBP4□□□□□ -1.77
HMGB3P23-201ENST00000414981 JAKMIP3Q5VZ66 844 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 SASS6Q6UVJ0 657 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 B4GALNT4Q76KP1 1039 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 BHLHA9Q7RTU4 235 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 ZNF354CQ86Y25 554 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 FAM184AQ8NB25 1140 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 APPL2Q8NEU8 664 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 HMGB4Q8WW32 186 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 CAMK1GQ96NX5 476 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 KATNAL1Q9BW62 490 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 KRTAP1-5Q9BYS1 174 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 PANK2Q9BZ23 570 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 SH3GLB2Q9NR46 395 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4□□□□□ -1.77
HMGB3P23-201ENST00000414981 PRDM4Q9UKN5 801 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 TRPC5Q9UL62 973 aaPredicted RBP4□□□□□ -1.77
HMGB3P23-201ENST00000414981 PCDHGB3Q9Y5G1 929 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 COPG1Q9Y678 874 aaKnown RBP4□□□□□ -1.77
HMGB3P23-201ENST00000414981 DGKBQ9Y6T7 804 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 SAMD9LQ8IVG5 1584 aa4□□□□□ -1.77
HMGB3P23-201ENST00000414981 CACNA1IQ9P0X4 2223 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 ZNF518AQ6AHZ1 1483 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 NRXN1Q9ULB1 1477 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 CEP152O94986 1710 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 ADGRB2O60241 1585 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 PPIP5K1Q6PFW1 1433 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 TRIM64CA6NLI5 447 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 AQP12BA6NM10 295 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 SLC38A8A6NNN8 435 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 LGALS16A8MUM7 142 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 C19orf81C9J6K1 198 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 CHL1O00533 1208 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 SKAP2O75563 359 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 LETM1O95202 739 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 TPM3P06753 285 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 ITGA2BP08514 1039 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 CHRNB1P11230 501 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 HOXB6P17509 224 aaKnown RBP3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 AKT1P31749 480 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 SERPINF1P36955 418 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 RXRGP48443 463 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 TNFAIP2Q03169 654 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 SLC10A5Q5PT55 438 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 VWA5B1Q5TIE3 1220 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 ASPHD1Q5U4P2 390 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 XRRA1Q6P2D8 792 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 NFRKBQ6P4R8 1299 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 ATF7IPQ6VMQ6 1270 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 C1orf122Q6ZSJ8 110 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 MAATS1Q7Z4T9 603 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 MDGA2Q7Z553 956 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 SNX32Q86XE0 403 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 NBPF5PQ86XG9 351 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 PELI3Q8N2H9 469 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 OR1N1Q8NGS0 311 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 KAT2AQ92830 837 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 SYAP1Q96A49 352 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 EME1Q96AY2 570 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 EIF2AK1Q9BQI3 630 aaKnown RBP3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 RTKNQ9BST9 563 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 TMEM120AQ9BXJ8 343 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 OSBPL5Q9H0X9 879 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 PLCB1Q9NQ66 1216 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 PIK3R4Q99570 1358 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 CLTCL1P53675 1640 aa3.99□□□□□ -1.77
HMGB3P23-201ENST00000414981 FANCAO15360 1455 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 MED14O60244 1454 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 CDC42BPBQ9Y5S2 1711 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 VWDEQ8N2E2 1590 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 NOS1P29475 1434 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 TRAPPC8Q9Y2L5 1435 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 IGKV2D-30A0A075B6S6 120 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 ABHD14A-ACY1A0A1B0GW23 586 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 A6NNC1 897 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 SYT5O00445 386 aa3.98□□□□□ -1.77
HMGB3P23-201ENST00000414981 NEURL1O76050 574 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms