RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 FBXO25Q8TCJ0 367 aa15.8■□□□□ 0.12
SHMT2-202ENST00000414700 SPATA13Q96N96 652 aa15.8■□□□□ 0.12
SHMT2-202ENST00000414700 ACE2Q9BYF1 805 aaPredicted RBP15.8■□□□□ 0.12
SHMT2-202ENST00000414700 PDFQ9HBH1 243 aa15.8■□□□□ 0.12
SHMT2-202ENST00000414700 PPANQ9NQ55 473 aaKnown RBP15.8■□□□□ 0.12
SHMT2-202ENST00000414700 ABCB8Q9NUT2 735 aa15.8■□□□□ 0.12
SHMT2-202ENST00000414700 GTSE1Q9NYZ3 720 aa15.8■□□□□ 0.12
SHMT2-202ENST00000414700 ZBTB24O43167 697 aaPredicted RBP15.8■□□□□ 0.12
SHMT2-202ENST00000414700 MGRN1O60291 552 aa15.8■□□□□ 0.12
SHMT2-202ENST00000414700 HSPA9P38646 679 aaKnown RBP15.8■□□□□ 0.12
SHMT2-202ENST00000414700 SCTRP47872 440 aa15.8■□□□□ 0.12
SHMT2-202ENST00000414700 PLTPP55058 493 aa15.8■□□□□ 0.12
SHMT2-202ENST00000414700 ARF5P84085 180 aa15.8■□□□□ 0.12
SHMT2-202ENST00000414700 GAD2Q05329 585 aa15.8■□□□□ 0.12
SHMT2-202ENST00000414700 ZNF33AQ06730 810 aa15.8■□□□□ 0.12
SHMT2-202ENST00000414700 TEX44Q53QW1 395 aa15.8■□□□□ 0.12
SHMT2-202ENST00000414700 LINGO4Q6UY18 593 aa15.8■□□□□ 0.12
SHMT2-202ENST00000414700 PID1Q7Z2X4 250 aa15.8■□□□□ 0.12
SHMT2-202ENST00000414700 LRRC49Q8IUZ0 686 aa15.8■□□□□ 0.12
SHMT2-202ENST00000414700 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.8■□□□□ 0.12
SHMT2-202ENST00000414700 ELSPBP1Q96BH3 223 aa15.8■□□□□ 0.12
SHMT2-202ENST00000414700 SNF8Q96H20 258 aa15.8■□□□□ 0.12
SHMT2-202ENST00000414700 LMLNQ96KR4 655 aa15.8■□□□□ 0.12
SHMT2-202ENST00000414700 SLC24A3Q9HC58 644 aa15.8■□□□□ 0.12
SHMT2-202ENST00000414700 MARK1Q9P0L2 795 aa15.8■□□□□ 0.12
SHMT2-202ENST00000414700 KLHL8Q9P2G9 620 aaPredicted RBP15.8■□□□□ 0.12
SHMT2-202ENST00000414700 VPS28Q9UK41 221 aa15.8■□□□□ 0.12
SHMT2-202ENST00000414700 PLAAQ9Y263 795 aa15.8■□□□□ 0.12
SHMT2-202ENST00000414700 TTLL3Q9Y4R7 772 aa15.8■□□□□ 0.12
SHMT2-202ENST00000414700 F5P12259 2224 aa15.8■□□□□ 0.12
SHMT2-202ENST00000414700 TCRBV7S3A2A0A539 114 aa15.79■□□□□ 0.12
SHMT2-202ENST00000414700 C2CD4DB7Z1M9 353 aa15.79■□□□□ 0.12
SHMT2-202ENST00000414700 PRAMEF11O60813 436 aa15.79■□□□□ 0.12
SHMT2-202ENST00000414700 CD160O95971 181 aa15.79■□□□□ 0.12
SHMT2-202ENST00000414700 ADH5P11766 374 aa15.79■□□□□ 0.12
SHMT2-202ENST00000414700 PSMC3P17980 439 aa15.79■□□□□ 0.12
SHMT2-202ENST00000414700 ETFBP38117 255 aa15.79■□□□□ 0.12
SHMT2-202ENST00000414700 ITGA8P53708 1063 aa15.79■□□□□ 0.12
SHMT2-202ENST00000414700 DRG2P55039 364 aaKnown RBP15.79■□□□□ 0.12
SHMT2-202ENST00000414700 BASP1P80723 227 aaKnown RBP15.79■□□□□ 0.12
SHMT2-202ENST00000414700 IL10RBQ08334 325 aa15.79■□□□□ 0.12
SHMT2-202ENST00000414700 SMAD4Q13485 552 aaKnown RBP15.79■□□□□ 0.12
SHMT2-202ENST00000414700 HLTFQ14527 1009 aaKnown RBP eCLIP15.79■□□□□ 0.12
SHMT2-202ENST00000414700 E2F5Q15329 346 aa15.79■□□□□ 0.12
SHMT2-202ENST00000414700 GAB4Q2WGN9 574 aa15.79■□□□□ 0.12
SHMT2-202ENST00000414700 ANKRD22Q5VYY1 191 aa15.79■□□□□ 0.12
SHMT2-202ENST00000414700 IZUMO3Q5VZ72 239 aa15.79■□□□□ 0.12
SHMT2-202ENST00000414700 NAIF1Q69YI7 327 aaPredicted RBP15.79■□□□□ 0.12
SHMT2-202ENST00000414700 CACNA2D3Q8IZS8 1091 aa15.79■□□□□ 0.12
SHMT2-202ENST00000414700 CPT1BQ92523 772 aa15.79■□□□□ 0.12
SHMT2-202ENST00000414700 MAML1Q92585 1016 aa15.79■□□□□ 0.12
SHMT2-202ENST00000414700 RSRC1Q96IZ7 334 aaKnown RBP15.79■□□□□ 0.12
SHMT2-202ENST00000414700 PWWP2AQ96N64 755 aa15.79■□□□□ 0.12
SHMT2-202ENST00000414700 IL12RB2Q99665 862 aa15.79■□□□□ 0.12
SHMT2-202ENST00000414700 GORASP1Q9BQQ3 440 aa15.79■□□□□ 0.12
SHMT2-202ENST00000414700 ECT2Q9H8V3 914 aa15.79■□□□□ 0.12
SHMT2-202ENST00000414700 ETNK1Q9HBU6 452 aa15.79■□□□□ 0.12
SHMT2-202ENST00000414700 RAB6BQ9NRW1 208 aa15.79■□□□□ 0.12
SHMT2-202ENST00000414700 ZDHHC18Q9NUE0 388 aa15.79■□□□□ 0.12
SHMT2-202ENST00000414700 PAK5Q9P286 719 aa15.79■□□□□ 0.12
SHMT2-202ENST00000414700 EPS15L1Q9UBC2 864 aa15.79■□□□□ 0.12
SHMT2-202ENST00000414700 MUC3AQ02505 3323 aa15.79■□□□□ 0.12
SHMT2-202ENST00000414700 BPTFQ12830 3046 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 DNALI1O14645 258 aaPredicted RBP15.78■□□□□ 0.12
SHMT2-202ENST00000414700 KDELR3O43731 214 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 ZMPSTE24O75844 475 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 HLA-DQB2P05538 268 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 PSMB4P28070 264 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 HPDP32754 393 aaPredicted RBP15.78■□□□□ 0.12
SHMT2-202ENST00000414700 OXCT1P55809 520 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 IFI35P80217 286 aaPredicted RBP15.78■□□□□ 0.12
SHMT2-202ENST00000414700 HTR4Q13639 388 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 NAA25Q14CX7 972 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 SPRED3Q2MJR0 410 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 TIGD7Q6NT04 549 aaPredicted RBP15.78■□□□□ 0.12
SHMT2-202ENST00000414700 ARHGEF18Q6ZSZ5 1173 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 OTOP3Q7RTS5 596 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 ATP2A3Q93084 1043 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 HLA-CQ95604 372 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 SEC16BQ96JE7 1060 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 TEKT5Q96M29 485 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 BATF3Q9NR55 127 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 RBM22Q9NW64 420 aaKnown RBP eCLIP15.78■□□□□ 0.128e-10■■■■■ 40.7
SHMT2-202ENST00000414700 THG1LQ9NWX6 298 aaKnown RBP15.78■□□□□ 0.12
SHMT2-202ENST00000414700 VPS51Q9UID3 782 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 TICRRQ7Z2Z1 1910 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 TTC24A2A3L6 582 aaPredicted RBP15.78■□□□□ 0.12
SHMT2-202ENST00000414700 MUSKO15146 869 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 OPHN1O60890 802 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 GJB3O75712 270 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 MT-CO1P00395 513 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 MYZAPP0CAP1 466 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 GDI1P31150 447 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 MAXP61244 160 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 TFF2Q03403 129 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 PLEKHG6Q3KR16 790 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 FUT11Q495W5 492 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 RNASEH2BQ5TBB1 312 aaKnown RBP15.78■□□□□ 0.12
SHMT2-202ENST00000414700 KIAA1958Q8N8K9 716 aa15.78■□□□□ 0.12
SHMT2-202ENST00000414700 CCHCR1Q8TD31 782 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms