RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 ADRB3P13945 408 aa15.03■□□□□ -0
CBX3-203ENST00000409747 PRLRP16471 622 aa15.03■□□□□ -0
CBX3-203ENST00000409747 DESP17661 470 aa15.03■□□□□ -0
CBX3-203ENST00000409747 CCNHP51946 323 aaPredicted RBP15.03■□□□□ -0
CBX3-203ENST00000409747 RPS21P63220 83 aaKnown RBP15.03■□□□□ -0
CBX3-203ENST00000409747 UBXN1Q04323 297 aa15.03■□□□□ -0
CBX3-203ENST00000409747 BNIP3Q12983 259 aa15.03■□□□□ -0
CBX3-203ENST00000409747 POLD3Q15054 466 aaPredicted RBP15.03■□□□□ -0
CBX3-203ENST00000409747 CLEC16AQ2KHT3 1053 aa15.03■□□□□ -0
CBX3-203ENST00000409747 FBXL19Q6PCT2 694 aa15.03■□□□□ -0
CBX3-203ENST00000409747 PHF13Q86YI8 300 aaPredicted RBP15.03■□□□□ -0
CBX3-203ENST00000409747 JOSD2Q8TAC2 188 aa15.03■□□□□ -0
CBX3-203ENST00000409747 NTAN1Q96AB6 310 aa15.03■□□□□ -0
CBX3-203ENST00000409747 LRIG1Q96JA1 1093 aa15.03■□□□□ -0
CBX3-203ENST00000409747 MAGEH1Q9H213 219 aa15.03■□□□□ -0
CBX3-203ENST00000409747 TRABD2BA6NFA1 517 aa15.02□□□□□ -0.01
CBX3-203ENST00000409747 A6NNZ2 444 aa15.02□□□□□ -0.01
CBX3-203ENST00000409747 AP1G1O43747 822 aa15.02□□□□□ -0.01
CBX3-203ENST00000409747 RAMP2O60895 175 aa15.02□□□□□ -0.01
CBX3-203ENST00000409747 PLEKP08567 350 aaPredicted RBP15.02□□□□□ -0.01
CBX3-203ENST00000409747 CKMT2P17540 419 aa15.02□□□□□ -0.01
CBX3-203ENST00000409747 CDK11BP21127 795 aaKnown RBP15.02□□□□□ -0.01
CBX3-203ENST00000409747 GPD1P21695 349 aa15.02□□□□□ -0.01
CBX3-203ENST00000409747 L1CAMP32004 1257 aa15.02□□□□□ -0.01
CBX3-203ENST00000409747 PTP4A2Q12974 167 aa15.02□□□□□ -0.01
CBX3-203ENST00000409747 DNAJC3Q13217 504 aa15.02□□□□□ -0.01
CBX3-203ENST00000409747 CAMK2BQ13554 666 aa15.02□□□□□ -0.01
CBX3-203ENST00000409747 TMEM259Q4ZIN3 620 aa15.02□□□□□ -0.01
CBX3-203ENST00000409747 KANSL1Q7Z3B3 1105 aa15.02□□□□□ -0.01
CBX3-203ENST00000409747 PHLDB2Q86SQ0 1253 aa15.02□□□□□ -0.01
CBX3-203ENST00000409747 NLRP14Q86W24 1093 aa15.02□□□□□ -0.01
CBX3-203ENST00000409747 DCP2Q8IU60 420 aaKnown RBP15.02□□□□□ -0.01
CBX3-203ENST00000409747 TSC1Q92574 1164 aa15.02□□□□□ -0.01
CBX3-203ENST00000409747 KLK6Q92876 244 aa15.02□□□□□ -0.01
CBX3-203ENST00000409747 ARHGEF2Q92974 986 aaKnown RBP15.02□□□□□ -0.01
CBX3-203ENST00000409747 RAB7BQ96AH8 199 aa15.02□□□□□ -0.01
CBX3-203ENST00000409747 MYOCQ99972 504 aa15.02□□□□□ -0.01
CBX3-203ENST00000409747 ZDHHC6Q9H6R6 413 aa15.02□□□□□ -0.01
CBX3-203ENST00000409747 SEPT11Q9NVA2 429 aaKnown RBP15.02□□□□□ -0.01
CBX3-203ENST00000409747 KLHL11Q9NVR0 708 aa15.02□□□□□ -0.01
CBX3-203ENST00000409747 DNAI1Q9UI46 699 aa15.02□□□□□ -0.01
CBX3-203ENST00000409747 CA5BQ9Y2D0 317 aa15.02□□□□□ -0.01
CBX3-203ENST00000409747 FCF1Q9Y324 198 aaKnown RBP15.02□□□□□ -0.01
CBX3-203ENST00000409747 ITPR1Q14643 2758 aa15.02□□□□□ -0.01
CBX3-203ENST00000409747 NBEAQ8NFP9 2946 aa15.02□□□□□ -0.01
CBX3-203ENST00000409747 FAM149AA5PLN7 773 aa15.01□□□□□ -0.01
CBX3-203ENST00000409747 ZSCAN5CA6NGD5 496 aaPredicted RBP15.01□□□□□ -0.01
CBX3-203ENST00000409747 LRIG2O94898 1065 aa15.01□□□□□ -0.01
CBX3-203ENST00000409747 JUPP14923 745 aa15.01□□□□□ -0.01
CBX3-203ENST00000409747 RFC1P35251 1148 aaPredicted RBP15.01□□□□□ -0.01
CBX3-203ENST00000409747 ACVRL1P37023 503 aa15.01□□□□□ -0.01
CBX3-203ENST00000409747 HDAC4P56524 1084 aa15.01□□□□□ -0.01
CBX3-203ENST00000409747 SNRPD1P62314 119 aaKnown RBP15.01□□□□□ -0.01
CBX3-203ENST00000409747 C1QBPQ07021 282 aaKnown RBP15.01□□□□□ -0.01
CBX3-203ENST00000409747 ABI3BPQ7Z7G0 1075 aa15.01□□□□□ -0.01
CBX3-203ENST00000409747 SLFN11Q7Z7L1 901 aa15.01□□□□□ -0.01
CBX3-203ENST00000409747 RYBPQ8N488 228 aaPredicted RBP15.01□□□□□ -0.01
CBX3-203ENST00000409747 NXPE2Q96DL1 559 aa15.01□□□□□ -0.01
CBX3-203ENST00000409747 IFT43Q96FT9 208 aa15.01□□□□□ -0.01
CBX3-203ENST00000409747 FEM1CQ96JP0 617 aa15.01□□□□□ -0.01
CBX3-203ENST00000409747 ERGIC2Q96RQ1 377 aa15.01□□□□□ -0.01
CBX3-203ENST00000409747 PCDHB18PQ96TA0 734 aa15.01□□□□□ -0.01
CBX3-203ENST00000409747 CALN1Q9BXU9 219 aa15.01□□□□□ -0.01
CBX3-203ENST00000409747 OSBPL1AQ9BXW6 950 aa15.01□□□□□ -0.01
CBX3-203ENST00000409747 TM6SF2Q9BZW4 377 aa15.01□□□□□ -0.01
CBX3-203ENST00000409747 RALYQ9UKM9 306 aaKnown RBP15.01□□□□□ -0.01
CBX3-203ENST00000409747 ZFR2Q9UPR6 939 aaKnown RBP15.01□□□□□ -0.01
CBX3-203ENST00000409747 GPSM3Q9Y4H4 160 aa15.01□□□□□ -0.01
CBX3-203ENST00000409747 CHD5Q8TDI0 1954 aa15.01□□□□□ -0.01
CBX3-203ENST00000409747 SIGLEC16A6NMB1 481 aa15□□□□□ -0.01
CBX3-203ENST00000409747 SDC3O75056 442 aa15□□□□□ -0.01
CBX3-203ENST00000409747 MBD3O95983 291 aa15□□□□□ -0.01
CBX3-203ENST00000409747 GSRP00390 522 aa15□□□□□ -0.01
CBX3-203ENST00000409747 AIF1P55008 147 aa15□□□□□ -0.01
CBX3-203ENST00000409747 ZNF211Q13398 564 aaPredicted RBP15□□□□□ -0.01
CBX3-203ENST00000409747 RAB6CQ53S08 254 aa15□□□□□ -0.01
CBX3-203ENST00000409747 EFHC2Q5JST6 749 aa15□□□□□ -0.01
CBX3-203ENST00000409747 SEL1L3Q68CR1 1132 aa15□□□□□ -0.01
CBX3-203ENST00000409747 PPP1R2P3Q6NXS1 205 aa15□□□□□ -0.01
CBX3-203ENST00000409747 DNAJC24Q6P3W2 148 aa15□□□□□ -0.01
CBX3-203ENST00000409747 GCNT7Q6ZNI0 430 aa15□□□□□ -0.01
CBX3-203ENST00000409747 MON1BQ7L1V2 547 aa15□□□□□ -0.01
CBX3-203ENST00000409747 CCDC185Q8N715 623 aa15□□□□□ -0.01
CBX3-203ENST00000409747 CASKIN2Q8WXE0 1202 aa15□□□□□ -0.01
CBX3-203ENST00000409747 ARHGEF26Q96DR7 871 aa15□□□□□ -0.01
CBX3-203ENST00000409747 RAB6CQ9H0N0 254 aa15□□□□□ -0.01
CBX3-203ENST00000409747 FZD3Q9NPG1 666 aa15□□□□□ -0.01
CBX3-203ENST00000409747 NEU3Q9UQ49 428 aa15□□□□□ -0.01
CBX3-203ENST00000409747 FADS3Q9Y5Q0 445 aa15□□□□□ -0.01
CBX3-203ENST00000409747 HS3ST3A1Q9Y663 406 aa15□□□□□ -0.01
CBX3-203ENST00000409747 LRRC10BA6NIK2 292 aa15□□□□□ -0.01
CBX3-203ENST00000409747 FAM72CH0Y354 149 aa15□□□□□ -0.01
CBX3-203ENST00000409747 TSPAN6O43657 245 aa15□□□□□ -0.01
CBX3-203ENST00000409747 GJB6O95452 261 aa15□□□□□ -0.01
CBX3-203ENST00000409747 ALPPL2P10696 532 aa15□□□□□ -0.01
CBX3-203ENST00000409747 ACP1P24666 158 aa15□□□□□ -0.01
CBX3-203ENST00000409747 ZNF143P52747 638 aaPredicted RBP15□□□□□ -0.01
CBX3-203ENST00000409747 CYP4F3Q08477 520 aa15□□□□□ -0.01
CBX3-203ENST00000409747 MAPK8IP2Q13387 824 aaPredicted RBP15□□□□□ -0.01
CBX3-203ENST00000409747 PROX2Q3B8N5 592 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms