RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 FIBINQ8TAL6 211 aa13.05□□□□□ -0.32
CHRNA1-205ENST00000409542 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.05□□□□□ -0.32
CHRNA1-205ENST00000409542 RFFLQ8WZ73 363 aa13.05□□□□□ -0.32
CHRNA1-205ENST00000409542 SERAC1Q96JX3 654 aa13.05□□□□□ -0.32
CHRNA1-205ENST00000409542 LRRC72A6NJI9 287 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 RRP8O43159 456 aaKnown RBP13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 SYF2O95926 243 aaKnown RBP13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 CALCAP01258 141 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 VAV1P15498 845 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 RXRGP48443 463 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 PSMD8P48556 350 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 CCR5P51681 352 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 ADPRHP54922 357 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 HADHBP55084 474 aaKnown RBP13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 INSM1Q01101 510 aaPredicted RBP13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 SGO2Q562F6 1265 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 PITRM1Q5JRX3 1037 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 ALS2CLQ60I27 953 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 SND1Q7KZF4 910 aaKnown RBP eCLIP13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 GPR155Q7Z3F1 870 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 ZNF605Q86T29 641 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 ERICH1Q86X53 443 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 SPACA3Q8IXA5 215 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 APCDD1Q8J025 514 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 CFAP52Q8N1V2 620 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 STK40Q8N2I9 435 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 CARNMT1Q8N4J0 409 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 FBXL13Q8NEE6 735 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 OR14C36Q8NHC7 312 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 KCTD13Q8WZ19 329 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 TFAP2BQ92481 460 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 FGF11Q92914 225 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 FAXDC2Q96IV6 333 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 RPL10LQ96L21 214 aaKnown RBP13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 OMDQ99983 421 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 DNAI2Q9GZS0 605 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 XPO7Q9UIA9 1087 aaKnown RBP13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 NYNRINQ9P2P1 1898 aaKnown RBP13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 GOLGA6BA6NDN3 693 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 CCDC188H7C350 402 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 PGRMC1O00264 195 aaKnown RBP13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 RNASEH1O60930 286 aaKnown RBP13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 FYNP06241 537 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 CD19P15391 556 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 GOT1P17174 413 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 TNFAIP3P21580 790 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 GTF2H1P32780 548 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 DRD3P35462 400 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 MXI1P50539 228 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 SLC8A3P57103 927 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 ST8SIA6P61647 398 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 CXADRP78310 365 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 SLC7A5Q01650 507 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 TLE3Q04726 772 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 PROX2Q3B8N5 592 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 PMF1Q6P1K2 205 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 PEX26Q7Z412 305 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 NT5DC3Q86UY8 548 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 SIX6OS1Q8N1H7 587 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 MREGQ8N565 214 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 TTC39CQ8N584 583 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 UBR7Q8N806 425 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 LSM14AQ8ND56 463 aaKnown RBP13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 CTNNBL1Q8WYA6 563 aaPredicted RBP13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 PTPRN2Q92932 1015 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 HES6Q96HZ4 224 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 FCRL2Q96LA5 508 aaPredicted RBP13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 AGPAT1Q99943 283 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 ZSWIM1Q9BR11 485 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 CNGB3Q9NQW8 809 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 TTC7AQ9ULT0 858 aaPredicted RBP13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 FZD4Q9ULV1 537 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 PACSIN2Q9UNF0 486 aaPredicted RBP13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 CA5BQ9Y2D0 317 aa13.04□□□□□ -0.32
CHRNA1-205ENST00000409542 ANKRD62A6NC57 917 aa13.03□□□□□ -0.32
CHRNA1-205ENST00000409542 BHMG1C9JSJ3 638 aaPredicted RBP13.03□□□□□ -0.32
CHRNA1-205ENST00000409542 O00370 1275 aa13.03□□□□□ -0.32
CHRNA1-205ENST00000409542 FOXN3O00409 490 aaPredicted RBP13.03□□□□□ -0.32
CHRNA1-205ENST00000409542 SDC3O75056 442 aa13.03□□□□□ -0.32
CHRNA1-205ENST00000409542 HEXIM1O94992 359 aaKnown RBP13.03□□□□□ -0.32
CHRNA1-205ENST00000409542 ASLP04424 464 aa13.03□□□□□ -0.32
CHRNA1-205ENST00000409542 CDK4P11802 303 aa13.03□□□□□ -0.32
CHRNA1-205ENST00000409542 CKMT2P17540 419 aa13.03□□□□□ -0.32
CHRNA1-205ENST00000409542 GLDCP23378 1020 aa13.03□□□□□ -0.32
CHRNA1-205ENST00000409542 SLC11A2P49281 568 aa13.03□□□□□ -0.32
CHRNA1-205ENST00000409542 STK19P49842 368 aaPredicted RBP13.03□□□□□ -0.32
CHRNA1-205ENST00000409542 TBX4P57082 545 aa13.03□□□□□ -0.32
CHRNA1-205ENST00000409542 DCAF6Q58WW2 860 aa13.03□□□□□ -0.32
CHRNA1-205ENST00000409542 TAF3Q5VWG9 929 aa13.03□□□□□ -0.32
CHRNA1-205ENST00000409542 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.03□□□□□ -0.32
CHRNA1-205ENST00000409542 UNC45BQ8IWX7 931 aa13.03□□□□□ -0.32
CHRNA1-205ENST00000409542 SCML4Q8N228 414 aa13.03□□□□□ -0.32
CHRNA1-205ENST00000409542 SLC35F5Q8WV83 523 aa13.03□□□□□ -0.32
CHRNA1-205ENST00000409542 SKA1Q96BD8 255 aa13.03□□□□□ -0.32
CHRNA1-205ENST00000409542 NAF1Q96HR8 494 aaKnown RBP13.03□□□□□ -0.32
CHRNA1-205ENST00000409542 KRT12Q99456 494 aa13.03□□□□□ -0.32
CHRNA1-205ENST00000409542 SEMA4CQ9C0C4 833 aa13.03□□□□□ -0.32
CHRNA1-205ENST00000409542 ERVMER34-1Q9H9K5 563 aa13.03□□□□□ -0.32
CHRNA1-205ENST00000409542 HESX1Q9UBX0 185 aa13.03□□□□□ -0.32
CHRNA1-205ENST00000409542 AMFRQ9UKV5 643 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms