RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 PCDHGA7Q9Y5G6 932 aa17.04■□□□□ 0.32
CHMP3-203ENST00000409225 AHCTF1Q8WYP5 2266 aa17.03■□□□□ 0.32
CHMP3-203ENST00000409225 FPGTO14772 594 aa17.03■□□□□ 0.32
CHMP3-203ENST00000409225 CLDN11O75508 207 aa17.03■□□□□ 0.32
CHMP3-203ENST00000409225 GCATO75600 419 aa17.03■□□□□ 0.32
CHMP3-203ENST00000409225 ENDOD1O94919 500 aa17.03■□□□□ 0.32
CHMP3-203ENST00000409225 AFPP02771 609 aaKnown RBP17.03■□□□□ 0.32
CHMP3-203ENST00000409225 RHOCP08134 193 aa17.03■□□□□ 0.32
CHMP3-203ENST00000409225 ADRB3P13945 408 aa17.03■□□□□ 0.32
CHMP3-203ENST00000409225 HGFP14210 728 aa17.03■□□□□ 0.32
CHMP3-203ENST00000409225 FMO5P49326 533 aa17.03■□□□□ 0.32
CHMP3-203ENST00000409225 CDK17Q00537 523 aa17.03■□□□□ 0.32
CHMP3-203ENST00000409225 PRRT3Q5FWE3 981 aa17.03■□□□□ 0.32
CHMP3-203ENST00000409225 C22orf39Q6P5X5 142 aa17.03■□□□□ 0.32
CHMP3-203ENST00000409225 LINGO4Q6UY18 593 aa17.03■□□□□ 0.32
CHMP3-203ENST00000409225 RRAGAQ7L523 313 aa17.03■□□□□ 0.32
CHMP3-203ENST00000409225 PPP1R13BQ96KQ4 1090 aa17.03■□□□□ 0.32
CHMP3-203ENST00000409225 MED15Q96RN5 788 aa17.03■□□□□ 0.32
CHMP3-203ENST00000409225 TSG101Q99816 390 aa17.03■□□□□ 0.32
CHMP3-203ENST00000409225 C2orf49Q9BVC5 232 aaPredicted RBP17.03■□□□□ 0.32
CHMP3-203ENST00000409225 SLC4A5Q9BY07 1137 aa17.03■□□□□ 0.32
CHMP3-203ENST00000409225 APOBEC3BQ9UH17 382 aaKnown RBP17.03■□□□□ 0.32
CHMP3-203ENST00000409225 ARMCX3Q9UH62 379 aaPredicted RBP17.03■□□□□ 0.32
CHMP3-203ENST00000409225 PADI4Q9UM07 663 aa17.03■□□□□ 0.32
CHMP3-203ENST00000409225 TBC1D30Q9Y2I9 924 aa17.03■□□□□ 0.32
CHMP3-203ENST00000409225 FADS3Q9Y5Q0 445 aa17.03■□□□□ 0.32
CHMP3-203ENST00000409225 HS3ST4Q9Y661 456 aa17.03■□□□□ 0.32
CHMP3-203ENST00000409225 TLN1Q9Y490 2541 aaKnown RBP17.02■□□□□ 0.32
CHMP3-203ENST00000409225 NTN3O00634 580 aaPredicted RBP17.02■□□□□ 0.32
CHMP3-203ENST00000409225 CNTN5O94779 1100 aa17.02■□□□□ 0.32
CHMP3-203ENST00000409225 ANXA6P08133 673 aa17.02■□□□□ 0.32
CHMP3-203ENST00000409225 SFTPCP11686 197 aa17.02■□□□□ 0.32
CHMP3-203ENST00000409225 RECQLP46063 649 aaPredicted RBP17.02■□□□□ 0.32
CHMP3-203ENST00000409225 INHBCP55103 352 aa17.02■□□□□ 0.32
CHMP3-203ENST00000409225 CDH4P55283 916 aa17.02■□□□□ 0.32
CHMP3-203ENST00000409225 TLE1Q04724 770 aa17.02■□□□□ 0.32
CHMP3-203ENST00000409225 SGCGQ13326 291 aa17.02■□□□□ 0.32
CHMP3-203ENST00000409225 TBR1Q16650 682 aa17.02■□□□□ 0.32
CHMP3-203ENST00000409225 DPY19L3Q6ZPD9 716 aa17.02■□□□□ 0.32
CHMP3-203ENST00000409225 RAB11FIP2Q7L804 512 aa17.02■□□□□ 0.32
CHMP3-203ENST00000409225 DEFB106AQ8N104 65 aa17.02■□□□□ 0.32
CHMP3-203ENST00000409225 BTN2A2Q8WVV5 523 aa17.02■□□□□ 0.32
CHMP3-203ENST00000409225 FOXP3Q9BZS1 431 aa17.02■□□□□ 0.32
CHMP3-203ENST00000409225 SIK2Q9H0K1 926 aa17.02■□□□□ 0.32
CHMP3-203ENST00000409225 THAP9Q9H5L6 903 aa17.02■□□□□ 0.32
CHMP3-203ENST00000409225 IGLON5A6NGN9 336 aa17.01■□□□□ 0.31
CHMP3-203ENST00000409225 PPFIA2O75334 1257 aa17.01■□□□□ 0.31
CHMP3-203ENST00000409225 C1QBPQ07021 282 aaKnown RBP17.01■□□□□ 0.31
CHMP3-203ENST00000409225 NME3Q13232 169 aa17.01■□□□□ 0.31
CHMP3-203ENST00000409225 MANEAQ5SRI9 462 aa17.01■□□□□ 0.31
CHMP3-203ENST00000409225 ESRP1Q6NXG1 681 aaKnown RBP17.01■□□□□ 0.31
CHMP3-203ENST00000409225 KRBA2Q6ZNG9 492 aa17.01■□□□□ 0.31
CHMP3-203ENST00000409225 VASH2Q86V25 355 aa17.01■□□□□ 0.31
CHMP3-203ENST00000409225 ARHGEF19Q8IW93 802 aa17.01■□□□□ 0.31
CHMP3-203ENST00000409225 PHACTR4Q8IZ21 702 aa17.01■□□□□ 0.31
CHMP3-203ENST00000409225 GFM1Q96RP9 751 aaKnown RBP17.01■□□□□ 0.31
CHMP3-203ENST00000409225 KLF6Q99612 283 aaPredicted RBP17.01■□□□□ 0.31
CHMP3-203ENST00000409225 SEMA3CQ99985 751 aa17.01■□□□□ 0.31
CHMP3-203ENST00000409225 LRRC61Q9BV99 259 aa17.01■□□□□ 0.31
CHMP3-203ENST00000409225 STRADBQ9C0K7 418 aa17.01■□□□□ 0.31
CHMP3-203ENST00000409225 GULP1Q9UBP9 304 aa17.01■□□□□ 0.31
CHMP3-203ENST00000409225 PISDQ9UG56 409 aa17.01■□□□□ 0.31
CHMP3-203ENST00000409225 WASF2Q9Y6W5 498 aa17.01■□□□□ 0.31
CHMP3-203ENST00000409225 LMO7DNF2Z398 122 aa17■□□□□ 0.31
CHMP3-203ENST00000409225 AGRPO00253 132 aa17■□□□□ 0.31
CHMP3-203ENST00000409225 YY2O15391 372 aa17■□□□□ 0.31
CHMP3-203ENST00000409225 PAGE1O75459 146 aa17■□□□□ 0.31
CHMP3-203ENST00000409225 GRAP2O75791 330 aa17■□□□□ 0.31
CHMP3-203ENST00000409225 LIPCP11150 499 aa17■□□□□ 0.31
CHMP3-203ENST00000409225 KRT5P13647 590 aa17■□□□□ 0.31
CHMP3-203ENST00000409225 ITGB7P26010 798 aa17■□□□□ 0.31
CHMP3-203ENST00000409225 PRCPP42785 496 aa17■□□□□ 0.31
CHMP3-203ENST00000409225 CLCN6P51797 869 aa17■□□□□ 0.31
CHMP3-203ENST00000409225 THOP1P52888 689 aa17■□□□□ 0.31
CHMP3-203ENST00000409225 PMS1P54277 932 aaKnown RBP17■□□□□ 0.31
CHMP3-203ENST00000409225 CYP4F2P78329 520 aa17■□□□□ 0.31
CHMP3-203ENST00000409225 FKBP3Q00688 224 aaKnown RBP17■□□□□ 0.31
CHMP3-203ENST00000409225 EIF3IQ13347 325 aaKnown RBP17■□□□□ 0.31
CHMP3-203ENST00000409225 PKP1Q13835 747 aa17■□□□□ 0.31
CHMP3-203ENST00000409225 ALFQ53S48 1182 aa17■□□□□ 0.31
CHMP3-203ENST00000409225 ANKRD40Q6AI12 368 aa17■□□□□ 0.31
CHMP3-203ENST00000409225 TMEM110Q86TL2 294 aa17■□□□□ 0.31
CHMP3-203ENST00000409225 STK32AQ8WU08 396 aa17■□□□□ 0.31
CHMP3-203ENST00000409225 CCDC74AQ96AQ1 378 aa17■□□□□ 0.31
CHMP3-203ENST00000409225 LENG8Q96PV6 779 aaPredicted RBP17■□□□□ 0.31
CHMP3-203ENST00000409225 C1QTNF2Q9BXJ5 285 aa17■□□□□ 0.31
CHMP3-203ENST00000409225 SLC13A1Q9BZW2 595 aa17■□□□□ 0.31
CHMP3-203ENST00000409225 CLPBQ9H078 707 aa17■□□□□ 0.31
CHMP3-203ENST00000409225 METTL14Q9HCE5 456 aaKnown RBP17■□□□□ 0.31
CHMP3-203ENST00000409225 SIRPGQ9P1W8 387 aa17■□□□□ 0.31
CHMP3-203ENST00000409225 SEPT3Q9UH03 358 aa17■□□□□ 0.31
CHMP3-203ENST00000409225 RABGEF1Q9UJ41 708 aa17■□□□□ 0.31
CHMP3-203ENST00000409225 ACSL6Q9UKU0 697 aa17■□□□□ 0.31
CHMP3-203ENST00000409225 PNMA8BQ9ULN7 279 aaPredicted RBP17■□□□□ 0.31
CHMP3-203ENST00000409225 PCDHGA4Q9Y5G9 962 aa17■□□□□ 0.31
CHMP3-203ENST00000409225 A0A0D9SEW6 157 aa16.99■□□□□ 0.31
CHMP3-203ENST00000409225 TRIM49BA6NDI0 452 aa16.99■□□□□ 0.31
CHMP3-203ENST00000409225 D6RAR5 112 aa16.99■□□□□ 0.31
CHMP3-203ENST00000409225 LETM1O95202 739 aaPredicted RBP16.99■□□□□ 0.31
CHMP3-203ENST00000409225 ADCY5O95622 1261 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms