RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 ANKRD22Q5VYY1 191 aa20.8■□□□□ 0.92
CHKB-201ENST00000406938 HIBCHQ6NVY1 386 aaPredicted RBP20.8■□□□□ 0.92
CHKB-201ENST00000406938 PCGF5Q86SE9 256 aa20.8■□□□□ 0.92
CHKB-201ENST00000406938 ATP11CQ8NB49 1132 aa20.8■□□□□ 0.92
CHKB-201ENST00000406938 FBXO25Q8TCJ0 367 aa20.8■□□□□ 0.92
CHKB-201ENST00000406938 SORCS1Q8WY21 1168 aa20.8■□□□□ 0.92
CHKB-201ENST00000406938 ART4Q93070 314 aa20.8■□□□□ 0.92
CHKB-201ENST00000406938 EXOC2Q96KP1 924 aa20.8■□□□□ 0.92
CHKB-201ENST00000406938 POLR1EQ9GZS1 481 aaKnown RBP20.8■□□□□ 0.92
CHKB-201ENST00000406938 TRPV5Q9NQA5 729 aa20.8■□□□□ 0.92
CHKB-201ENST00000406938 ZDHHC18Q9NUE0 388 aa20.8■□□□□ 0.92
CHKB-201ENST00000406938 HAUS2Q9NVX0 235 aa20.8■□□□□ 0.92
CHKB-201ENST00000406938 THEGQ9P2T0 379 aa20.8■□□□□ 0.92
CHKB-201ENST00000406938 ANAPC5Q9UJX4 755 aa20.8■□□□□ 0.92
CHKB-201ENST00000406938 TCRBV7S3A2A0A539 114 aa20.79■□□□□ 0.92
CHKB-201ENST00000406938 PRRT4C9JH25 899 aa20.79■□□□□ 0.92
CHKB-201ENST00000406938 SMAD6O43541 496 aaKnown RBP20.79■□□□□ 0.92
CHKB-201ENST00000406938 TMEM63AO94886 807 aa20.79■□□□□ 0.92
CHKB-201ENST00000406938 TUBBP07437 444 aa20.79■□□□□ 0.92
CHKB-201ENST00000406938 APRTP07741 180 aa20.79■□□□□ 0.92
CHKB-201ENST00000406938 MORF4L2Q15014 288 aa20.79■□□□□ 0.92
CHKB-201ENST00000406938 SFTPA1Q8IWL2 248 aa20.79■□□□□ 0.92
CHKB-201ENST00000406938 NAT8LQ8N9F0 302 aa20.79■□□□□ 0.92
CHKB-201ENST00000406938 CYB5D2Q8WUJ1 264 aa20.79■□□□□ 0.92
CHKB-201ENST00000406938 PRCCQ92733 491 aaPredicted RBP20.79■□□□□ 0.92
CHKB-201ENST00000406938 DNASE1L2Q92874 299 aa20.79■□□□□ 0.92
CHKB-201ENST00000406938 OXNAD1Q96HP4 312 aaPredicted RBP20.79■□□□□ 0.92
CHKB-201ENST00000406938 FCRL5Q96RD9 977 aa20.79■□□□□ 0.92
CHKB-201ENST00000406938 LHX3Q9UBR4 397 aa20.79■□□□□ 0.92
CHKB-201ENST00000406938 SHOC2Q9UQ13 582 aa20.79■□□□□ 0.92
CHKB-201ENST00000406938 COL6A3P12111 3177 aa20.79■□□□□ 0.92
CHKB-201ENST00000406938 E7EVH7 732 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 NARSO43776 548 aaKnown RBP20.78■□□□□ 0.92
CHKB-201ENST00000406938 GJB3O75712 270 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 SRCP12931 536 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 HSPA9P38646 679 aaKnown RBP20.78■□□□□ 0.92
CHKB-201ENST00000406938 MAGEA6P43360 314 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 RGRP47804 291 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 RHOAP61586 193 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 DSC2Q02487 901 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 SLC20A2Q08357 652 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 ALG1LQ6GMV1 187 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 CCNI2Q6ZMN8 369 aaPredicted RBP20.78■□□□□ 0.92
CHKB-201ENST00000406938 METTL3Q86U44 580 aaKnown RBP20.78■□□□□ 0.92
CHKB-201ENST00000406938 HOOK3Q86VS8 718 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 ADHFE1Q8IWW8 467 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 SH2D3CQ8N5H7 860 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 SPATA22Q8NHS9 363 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 EXOC4Q96A65 974 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 MLPHQ9BV36 600 aaPredicted RBP20.78■□□□□ 0.92
CHKB-201ENST00000406938 SLC25A51Q9H1U9 297 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 ERVW-1Q9UQF0 538 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 TTC24A2A3L6 582 aaPredicted RBP20.78■□□□□ 0.92
CHKB-201ENST00000406938 SPECC1L-ADORA2AF8WAN1 911 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 NDC80O14777 642 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 KAT7O95251 611 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 ASLP04424 464 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 ATP5BP06576 529 aaKnown RBP20.78■□□□□ 0.92
CHKB-201ENST00000406938 DLDP09622 509 aaKnown RBP20.78■□□□□ 0.92
CHKB-201ENST00000406938 CTHP32929 405 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 NIPAL4Q0D2K0 466 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 PRPSAP1Q14558 356 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 EIF4HQ15056 248 aaKnown RBP20.78■□□□□ 0.92
CHKB-201ENST00000406938 RNF135Q8IUD6 432 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 EIF1ADQ8N9N8 165 aaKnown RBP20.78■□□□□ 0.92
CHKB-201ENST00000406938 ARRDC2Q8TBH0 407 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 IMP4Q96G21 291 aaKnown RBP20.78■□□□□ 0.92
CHKB-201ENST00000406938 MRGPRX3Q96LB0 322 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 RBM15Q96T37 977 aaKnown RBP eCLIP20.78■□□□□ 0.92
CHKB-201ENST00000406938 SEMA3CQ99985 751 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 FAM129AQ9BZQ8 928 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 HEBP1Q9NRV9 189 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 ELOVL2Q9NXB9 296 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 UBP1Q9NZI7 540 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 PIAS3Q9Y6X2 628 aa20.78■□□□□ 0.92
CHKB-201ENST00000406938 TBC1D3BA6NDS4 549 aa20.77■□□□□ 0.92
CHKB-201ENST00000406938 MT-CYBP00156 380 aaPredicted RBP20.77■□□□□ 0.92
CHKB-201ENST00000406938 TPSB2P20231 275 aa20.77■□□□□ 0.92
CHKB-201ENST00000406938 GRIA2P42262 883 aa20.77■□□□□ 0.92
CHKB-201ENST00000406938 CAV1Q03135 178 aa20.77■□□□□ 0.92
CHKB-201ENST00000406938 ZP2Q05996 745 aa20.77■□□□□ 0.92
CHKB-201ENST00000406938 TDGQ13569 410 aa20.77■□□□□ 0.92
CHKB-201ENST00000406938 TPSAB1Q15661 275 aa20.77■□□□□ 0.92
CHKB-201ENST00000406938 PTPRNQ16849 979 aa20.77■□□□□ 0.92
CHKB-201ENST00000406938 PREPLQ4J6C6 727 aaPredicted RBP20.77■□□□□ 0.92
CHKB-201ENST00000406938 C22orf39Q6P5X5 142 aa20.77■□□□□ 0.92
CHKB-201ENST00000406938 PDCD7Q8N8D1 485 aaKnown RBP20.77■□□□□ 0.92
CHKB-201ENST00000406938 TM6SF2Q9BZW4 377 aa20.77■□□□□ 0.92
CHKB-201ENST00000406938 EIF2B3Q9NR50 452 aaKnown RBP20.77■□□□□ 0.92
CHKB-201ENST00000406938 PRKAG3Q9UGI9 489 aa20.77■□□□□ 0.92
CHKB-201ENST00000406938 SLCO3A1Q9UIG8 710 aa20.77■□□□□ 0.92
CHKB-201ENST00000406938 MIA3Q5JRA6 1907 aa20.77■□□□□ 0.91
CHKB-201ENST00000406938 GOLGA8MH3BSY2 632 aa20.76■□□□□ 0.91
CHKB-201ENST00000406938 ANXA9O76027 345 aa20.76■□□□□ 0.91
CHKB-201ENST00000406938 MMP2P08253 660 aa20.76■□□□□ 0.91
CHKB-201ENST00000406938 SRFP11831 508 aa20.76■□□□□ 0.91
CHKB-201ENST00000406938 CR2P20023 1033 aa20.76■□□□□ 0.91
CHKB-201ENST00000406938 CD86P42081 329 aa20.76■□□□□ 0.91
CHKB-201ENST00000406938 LMAN1P49257 510 aa20.76■□□□□ 0.91
CHKB-201ENST00000406938 TXNDC11Q6PKC3 985 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms