RNA–Protein interactions for RNA: ENST00000406503.1

PRAME-206, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRAME, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-206ENST00000406503 PNMA8BQ9ULN7 279 aaPredicted RBP13.15□□□□□ -0.3
PRAME-206ENST00000406503 NEU3Q9UQ49 428 aa13.15□□□□□ -0.3
PRAME-206ENST00000406503 FADS3Q9Y5Q0 445 aa13.15□□□□□ -0.3
PRAME-206ENST00000406503 EIF4E1BA6NMX2 242 aaKnown RBP13.14□□□□□ -0.31
PRAME-206ENST00000406503 A6NNZ2 444 aa13.14□□□□□ -0.31
PRAME-206ENST00000406503 K7ESM1 405 aa13.14□□□□□ -0.31
PRAME-206ENST00000406503 SCAMP1O15126 338 aa13.14□□□□□ -0.31
PRAME-206ENST00000406503 DXOO77932 396 aaKnown RBP13.14□□□□□ -0.31
PRAME-206ENST00000406503 PCDH8O95206 1070 aa13.14□□□□□ -0.31
PRAME-206ENST00000406503 FGFR1OPO95684 399 aaKnown RBP13.14□□□□□ -0.31
PRAME-206ENST00000406503 PAK4O96013 591 aaPredicted RBP13.14□□□□□ -0.31
PRAME-206ENST00000406503 MPOP05164 745 aa13.14□□□□□ -0.31
PRAME-206ENST00000406503 ADRB3P13945 408 aa13.14□□□□□ -0.31
PRAME-206ENST00000406503 AKT2P31751 481 aa13.14□□□□□ -0.31
PRAME-206ENST00000406503 KRT9P35527 623 aa13.14□□□□□ -0.31
PRAME-206ENST00000406503 ACTN2P35609 894 aa13.14□□□□□ -0.31
PRAME-206ENST00000406503 SCNN1AP37088 669 aa13.14□□□□□ -0.31
PRAME-206ENST00000406503 ABL2P42684 1182 aa13.14□□□□□ -0.31
PRAME-206ENST00000406503 DEUP1Q05D60 604 aa13.14□□□□□ -0.31
PRAME-206ENST00000406503 SLC25A52Q3SY17 297 aa13.14□□□□□ -0.31
PRAME-206ENST00000406503 SMYD5Q6GMV2 418 aa13.14□□□□□ -0.31
PRAME-206ENST00000406503 GPR155Q7Z3F1 870 aa13.14□□□□□ -0.31
PRAME-206ENST00000406503 CREBRFQ8IUR6 639 aa13.14□□□□□ -0.31
PRAME-206ENST00000406503 ZNF843Q8N446 348 aa13.14□□□□□ -0.31
PRAME-206ENST00000406503 IFT43Q96FT9 208 aa13.14□□□□□ -0.31
PRAME-206ENST00000406503 CFAP57Q96MR6 1250 aa13.14□□□□□ -0.31
PRAME-206ENST00000406503 ASCL3Q9NQ33 180 aa13.14□□□□□ -0.31
PRAME-206ENST00000406503 GGT7Q9UJ14 662 aa13.14□□□□□ -0.31
PRAME-206ENST00000406503 TMEM59LQ9UK28 342 aa13.14□□□□□ -0.31
PRAME-206ENST00000406503 STAP1Q9ULZ2 295 aa13.14□□□□□ -0.31
PRAME-206ENST00000406503 FCF1Q9Y324 198 aaKnown RBP13.14□□□□□ -0.31
PRAME-206ENST00000406503 FHOD1Q9Y613 1164 aa13.14□□□□□ -0.31
PRAME-206ENST00000406503 HS3ST3A1Q9Y663 406 aa13.14□□□□□ -0.31
PRAME-206ENST00000406503 SPTY2D1-AS1A0A0U1RR47 76 aa13.13□□□□□ -0.31
PRAME-206ENST00000406503 TEX51A0A1B0GUA7 166 aa13.13□□□□□ -0.31
PRAME-206ENST00000406503 ILVBLA1L0T0 632 aa13.13□□□□□ -0.31
PRAME-206ENST00000406503 CSO75390 466 aaKnown RBP13.13□□□□□ -0.31
PRAME-206ENST00000406503 GP1BAP07359 652 aa13.13□□□□□ -0.31
PRAME-206ENST00000406503 NME1P15531 152 aaKnown RBP13.13□□□□□ -0.31
PRAME-206ENST00000406503 CYP11B1P15538 503 aa13.13□□□□□ -0.31
PRAME-206ENST00000406503 TGM2P21980 687 aa13.13□□□□□ -0.31
PRAME-206ENST00000406503 ITGB7P26010 798 aa13.13□□□□□ -0.31
PRAME-206ENST00000406503 OR1E1P30953 314 aa13.13□□□□□ -0.31
PRAME-206ENST00000406503 L1CAMP32004 1257 aa13.13□□□□□ -0.31
PRAME-206ENST00000406503 GKP32189 559 aa13.13□□□□□ -0.31
PRAME-206ENST00000406503 CCNHP51946 323 aaPredicted RBP13.13□□□□□ -0.31
PRAME-206ENST00000406503 NEK3P51956 506 aa13.13□□□□□ -0.31
PRAME-206ENST00000406503 CXADRP78310 365 aa13.13□□□□□ -0.31
PRAME-206ENST00000406503 C19orf57Q0VDD7 668 aa13.13□□□□□ -0.31
PRAME-206ENST00000406503 FAM102AQ5T9C2 384 aaPredicted RBP13.13□□□□□ -0.31
PRAME-206ENST00000406503 MANEALQ5VSG8 457 aa13.13□□□□□ -0.31
PRAME-206ENST00000406503 PTAR1Q7Z6K3 402 aaPredicted RBP13.13□□□□□ -0.31
PRAME-206ENST00000406503 FAM131BQ86XD5 332 aa13.13□□□□□ -0.31
PRAME-206ENST00000406503 LSM14AQ8ND56 463 aaKnown RBP13.13□□□□□ -0.31
PRAME-206ENST00000406503 ZNF548Q8NEK5 533 aaPredicted RBP13.13□□□□□ -0.31
PRAME-206ENST00000406503 CCDC114Q96M63 670 aa13.13□□□□□ -0.31
PRAME-206ENST00000406503 NAA15Q9BXJ9 866 aaKnown RBP13.13□□□□□ -0.31
PRAME-206ENST00000406503 SLC17A9Q9BYT1 436 aa13.13□□□□□ -0.31
PRAME-206ENST00000406503 MAGEB5Q9BZ81 275 aa13.13□□□□□ -0.31
PRAME-206ENST00000406503 CEP44Q9C0F1 390 aa13.13□□□□□ -0.31
PRAME-206ENST00000406503 SYNCQ9H7C4 482 aa13.13□□□□□ -0.31
PRAME-206ENST00000406503 DYRK4Q9NR20 520 aa13.13□□□□□ -0.31
PRAME-206ENST00000406503 DNAJC28Q9NX36 388 aa13.13□□□□□ -0.31
PRAME-206ENST00000406503 SSUH2Q9Y2M2 353 aa13.13□□□□□ -0.31
PRAME-206ENST00000406503 FARP1Q9Y4F1 1045 aaPredicted RBP13.13□□□□□ -0.31
PRAME-206ENST00000406503 SPENQ96T58 3664 aaKnown RBP13.13□□□□□ -0.31
PRAME-206ENST00000406503 AHCTF1Q8WYP5 2266 aa13.13□□□□□ -0.31
PRAME-206ENST00000406503 ZFC3H1O60293 1989 aaKnown RBP13.12□□□□□ -0.31
PRAME-206ENST00000406503 PMS2P1A4D2B8 440 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 AP1G1O43747 822 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 SRGAP2O75044 1071 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 USP12O75317 370 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 F9P00740 461 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 CSF2P04141 144 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 PLA2G2AP14555 144 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 ACVRL1P37023 503 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 RPS21P63220 83 aaKnown RBP13.12□□□□□ -0.31
PRAME-206ENST00000406503 NOMO3P69849 1222 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 GABREP78334 506 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 GNA12Q03113 381 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 EIF2B5Q13144 721 aaKnown RBP13.12□□□□□ -0.31
PRAME-206ENST00000406503 MAPK8IP2Q13387 824 aaPredicted RBP13.12□□□□□ -0.31
PRAME-206ENST00000406503 DRAP1Q14919 205 aaPredicted RBP13.12□□□□□ -0.31
PRAME-206ENST00000406503 CAMK4Q16566 473 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 MAN2A1Q16706 1144 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 CARD16Q5EG05 197 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 KIAA1161Q6NSJ0 714 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 GUSBP11Q6P575 273 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 LRRC31Q6UY01 552 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 ZNF783Q6ZMS7 281 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 NOP9Q86U38 636 aaKnown RBP13.12□□□□□ -0.31
PRAME-206ENST00000406503 PCDH20Q8N6Y1 951 aaKnown RBP13.12□□□□□ -0.31
PRAME-206ENST00000406503 TMEM35BQ8NCS4 154 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 ZNF248Q8NDW4 579 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 IFI44Q8TCB0 444 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 C18orf8Q96DM3 657 aa13.12□□□□□ -0.31
PRAME-206ENST00000406503 PRR11Q96HE9 360 aaPredicted RBP13.12□□□□□ -0.31
PRAME-206ENST00000406503 NAF1Q96HR8 494 aaKnown RBP13.12□□□□□ -0.31
PRAME-206ENST00000406503 ZNF578Q96N58 590 aaPredicted RBP13.12□□□□□ -0.31
PRAME-206ENST00000406503 HAPLN3Q96S86 360 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms