RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 ANKRD23Q86SG2 305 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 TMEM135Q86UB9 458 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 ZNF786Q8N393 782 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 ZNF280CQ8ND82 737 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 CENPIQ92674 756 aaPredicted RBP14.18□□□□□ -0.14
APOB-202ENST00000399256 SGF29Q96ES7 293 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 C1QTNF1Q9BXJ1 281 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 GTSE1Q9NYZ3 720 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 GMPR2Q9P2T1 348 aaKnown RBP14.18□□□□□ -0.14
APOB-202ENST00000399256 PHIPQ8WWQ0 1821 aa14.18□□□□□ -0.14
APOB-202ENST00000399256 PRORSD1PA6NEY8 169 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 ZNF839A8K0R7 811 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 H0YJX3 145 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 SOCS2O14508 198 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 DLX3O60479 287 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 SEC24DO94855 1032 aaPredicted RBP14.17□□□□□ -0.14
APOB-202ENST00000399256 GNAO1P09471 354 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 RBP5P82980 135 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 USP10Q14694 798 aaKnown RBP14.17□□□□□ -0.14
APOB-202ENST00000399256 HSDL1Q3SXM5 330 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 FAM219BQ5XKK7 198 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 FSTL5Q8N475 847 aaPredicted RBP14.17□□□□□ -0.14
APOB-202ENST00000399256 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.17□□□□□ -0.14
APOB-202ENST00000399256 FAM167AQ96KS9 214 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 DPEP3Q9H4B8 488 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 XPR1Q9UBH6 696 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 ADAMTS5Q9UNA0 930 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 IGKV6-21A0A0C4DH24 114 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 HEATR9A2RTY3 570 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 SAC3D1A6NKF1 404 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 CABYRO75952 493 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 APOA4P06727 396 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 MCF2P10911 925 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 GLUD2P49448 558 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 PITX1P78337 314 aaPredicted RBP14.17□□□□□ -0.14
APOB-202ENST00000399256 ANO4Q32M45 955 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 LRRC8EQ6NSJ5 796 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 SLC41A1Q8IVJ1 513 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 SPNS2Q8IVW8 549 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 RNF168Q8IYW5 571 aaPredicted RBP14.17□□□□□ -0.14
APOB-202ENST00000399256 RNF139Q8WU17 664 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 TBCCD1Q9NVR7 557 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 DUS2Q9NX74 493 aaKnown RBP14.17□□□□□ -0.14
APOB-202ENST00000399256 FZD10Q9ULW2 581 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 SLC8A2Q9UPR5 921 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 SLCO1B7G3V0H7 640 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 SDHDO14521 159 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 PPEF2O14830 753 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 DDHD2O94830 711 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 BMP10O95393 424 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 ETFBP38117 255 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 CD97P48960 835 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 ESRRGP62508 458 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 TUBA4AP68366 448 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 IGBP1P78318 339 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 PITRM1Q5JRX3 1037 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 NBPF12Q5TAG4 269 aaPredicted RBP14.17□□□□□ -0.14
APOB-202ENST00000399256 REP15Q6BDI9 236 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 CHSY3Q70JA7 882 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 GPR180Q86V85 440 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 KDM1BQ8NB78 822 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 ANKRD60Q9BZ19 345 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 CCDC167Q9P0B6 97 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 IGSF9Q9P2J2 1179 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 RLFQ13129 1914 aa14.17□□□□□ -0.14
APOB-202ENST00000399256 PSMD12O00232 456 aaPredicted RBP14.16□□□□□ -0.14
APOB-202ENST00000399256 AKAP10O43572 662 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 HNRNPLP14866 589 aaKnown RBP eCLIP14.16□□□□□ -0.141e-19■■□□□ 14.4
APOB-202ENST00000399256 PTPRAP18433 802 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 NMBRP28336 390 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 SULT1E1P49888 294 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 HK2P52789 917 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 PSTKQ8IV42 348 aaKnown RBP14.16□□□□□ -0.14
APOB-202ENST00000399256 HMGCLL1Q8TB92 370 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 RDH11Q8TC12 318 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 HM13Q8TCT9 377 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 UNC93B1Q9H1C4 597 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 CXCL16Q9H2A7 254 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 CACNA2D2Q9NY47 1150 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 UBP1Q9NZI7 540 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 SFMBT1Q9UHJ3 866 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 ZNHIT2Q9UHR6 403 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 CROCCQ5TZA2 2017 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 FBP2O00757 339 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 ARIH2O95376 493 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 STAMBPO95630 424 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 AP2A1O95782 977 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 KCTD21Q4G0X4 260 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 AGKQ53H12 422 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 SMYD5Q6GMV2 418 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 TTC33Q6PID6 262 aaPredicted RBP14.16□□□□□ -0.14
APOB-202ENST00000399256 FASTKD5Q7L8L6 764 aaKnown RBP14.16□□□□□ -0.14
APOB-202ENST00000399256 SLC26A9Q7LBE3 791 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 DNERQ8NFT8 737 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 OR6B3Q8NGW1 331 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 STYXQ8WUJ0 223 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 KIF12Q96FN5 646 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 SLC39A3Q9BRY0 314 aa14.16□□□□□ -0.14
APOB-202ENST00000399256 PAIP1Q9H074 479 aaKnown RBP14.16□□□□□ -0.14
APOB-202ENST00000399256 ASB7Q9H672 318 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms