RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 KATNAL2Q8IYT4 538 aa11.68□□□□□ -0.54
PCDHGA8-201ENST00000398604 TNS4Q8IZW8 715 aa11.68□□□□□ -0.54
PCDHGA8-201ENST00000398604 MSL3Q8N5Y2 521 aaKnown RBP11.68□□□□□ -0.54
PCDHGA8-201ENST00000398604 ZNF75CPQ92670 426 aaPredicted RBP11.68□□□□□ -0.54
PCDHGA8-201ENST00000398604 PANX3Q96QZ0 392 aa11.68□□□□□ -0.54
PCDHGA8-201ENST00000398604 POMKQ9H5K3 350 aa11.68□□□□□ -0.54
PCDHGA8-201ENST00000398604 TAGLN3Q9UI15 199 aa11.68□□□□□ -0.54
PCDHGA8-201ENST00000398604 VPS51Q9UID3 782 aa11.68□□□□□ -0.54
PCDHGA8-201ENST00000398604 MSRAQ9UJ68 235 aa11.68□□□□□ -0.54
PCDHGA8-201ENST00000398604 SALL4Q9UJQ4 1053 aa11.68□□□□□ -0.54
PCDHGA8-201ENST00000398604 TRBV23OR9-2A0A075B6M9 112 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 MRASO14807 208 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 SHBGP04278 402 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 ADH1AP07327 375 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 HNRNPH3P31942 346 aaKnown RBP11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 PRKCIP41743 596 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 EIF2B5Q13144 721 aaKnown RBP11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 GRTP1Q5TC63 336 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 CCDC149Q6ZUS6 474 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 TNIP2Q8NFZ5 429 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 ALG3Q92685 438 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 RPS6KB2Q9UBS0 482 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 AKAP11Q9UKA4 1901 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 ATRNL1Q5VV63 1379 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 KANSL1LA0AUZ9 987 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 SLCO1B7G3V0H7 640 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 UBXN8O00124 270 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 TM9SF1O15321 606 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 PROCP04070 461 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 CALB2P22676 271 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 PPP2R1BP30154 601 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 ANXA11P50995 505 aaKnown RBP11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 USP45Q70EL2 814 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 FAM35AQ86V20 835 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 SLC41A1Q8IVJ1 513 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 KIAA2013Q8IYS2 634 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 AHSPQ9NZD4 102 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 BTBD7Q9P203 1132 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 ASCC3Q8N3C0 2202 aaKnown RBP11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 PAPSS1O43252 624 aaPredicted RBP11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 COL1A1P02452 1464 aaPredicted RBP11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 TFEBP19484 476 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 GPR1P46091 355 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 RABGGTBP53611 331 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 IL5RAQ01344 420 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 ABRQ12979 859 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 GALNT3Q14435 633 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 CPSF6Q16630 551 aaKnown RBP eCLIP11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 FGD3Q5JSP0 725 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 ZNF662Q6ZS27 426 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 OR56A4Q8NGH8 313 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 HDAC10Q969S8 669 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 VAT1Q99536 393 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 GPR20Q99678 358 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 ZYG11BQ9C0D3 744 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 GANQ9H2C0 597 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 CATSPERZQ9NTU4 200 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 THAP1Q9NVV9 213 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 IL1RAPL1Q9NZN1 696 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 PTGES3LE9PB15 166 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 H0Y858 1186 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 H3BN98 237 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 TPP1O14773 563 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 PTPN3P26045 913 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 RPA3P35244 121 aaPredicted RBP11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 SNRPD1P62314 119 aaKnown RBP11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 IRX1P78414 480 aaPredicted RBP11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 ACAP1Q15027 740 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 KCNA10Q16322 511 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 BSNDQ8WZ55 320 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 KCTD14Q9BQ13 255 aaPredicted RBP11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 CROTQ9UKG9 612 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 CHKBQ9Y259 395 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 MYO5AQ9Y4I1 1855 aaKnown RBP11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 PAPPAQ13219 1627 aa11.67□□□□□ -0.54
PCDHGA8-201ENST00000398604 PLIN4Q96Q06 1357 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 PRR23D1E9PI22 279 aaPredicted RBP11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 USP2O75604 605 aaPredicted RBP11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 PRR23D2P0DMB1 279 aaPredicted RBP11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 RPL17P18621 184 aaKnown RBP11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 CRABP2P29373 138 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 FLT3P36888 993 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 TGM3Q08188 693 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 TUSC3Q13454 348 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 ABHD15Q6UXT9 468 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 IFNLR1Q8IU57 520 aaPredicted RBP11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 ACSS2Q9NR19 701 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 ZSCAN32Q9NX65 697 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 COL20A1Q9P218 1284 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 C2CD2Q9Y426 696 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 TMEM88BA6NKF7 163 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 ARHGEF9O43307 516 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 MTA2O94776 668 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 S100A3P33764 101 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 TOMM20Q15388 145 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 PTPN20Q4JDL3 420 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 SPANXN3Q5MJ09 141 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 HLA-DQA1Q5Y7H0 255 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 ARHGAP17Q68EM7 881 aa11.66□□□□□ -0.54
PCDHGA8-201ENST00000398604 ANKS1BQ7Z6G8 1248 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms