RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 SNX32Q86XE0 403 aa16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 ZNF567Q8N184 647 aa16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 CPNE1Q99829 537 aa16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 TCF7L2Q9NQB0 619 aa16.22■□□□□ 0.19
CHMP1A-201ENST00000397901 A0A096LPK6 155 aa16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 HACD1B0YJ81 288 aa16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 G3V2L1 256 aa16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 KCNK1O00180 336 aa16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 CLASP2O75122 1294 aaKnown RBP16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 BMP10O95393 424 aa16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 CHRNGP07510 517 aa16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 TXNP10599 105 aaKnown RBP16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 MPSTP25325 297 aa16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 TXNL4AP83876 142 aaKnown RBP16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 IFRD2Q12894 506 aaPredicted RBP16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 FAM187BQ17R55 369 aa16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 GRTP1Q5TC63 336 aa16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 FSTL4Q6MZW2 842 aa16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 ADAM32Q8TC27 787 aa16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 ISOC1Q96CN7 298 aa16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 THAP11Q96EK4 314 aa16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 RBBP8Q99708 897 aa16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 NFKBIZQ9BYH8 718 aa16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 CCDC68Q9H2F9 335 aa16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 ARMC7Q9H6L4 198 aa16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 COPS7BQ9H9Q2 264 aaPredicted RBP16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 PALMDQ9NP74 551 aa16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 GIN1Q9NXP7 522 aa16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 MYRFQ9Y2G1 1151 aa16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 RNF11Q9Y3C5 154 aa16.21■□□□□ 0.19
CHMP1A-201ENST00000397901 H3BNH8 94 aa16.21■□□□□ 0.18
CHMP1A-201ENST00000397901 STAMBPO95630 424 aa16.21■□□□□ 0.18
CHMP1A-201ENST00000397901 PIK3R1P27986 724 aa16.21■□□□□ 0.18
CHMP1A-201ENST00000397901 PGGT1BP53609 377 aa16.21■□□□□ 0.18
CHMP1A-201ENST00000397901 RPS3AP61247 264 aaKnown RBP16.21■□□□□ 0.18
CHMP1A-201ENST00000397901 ESRRGP62508 458 aa16.21■□□□□ 0.18
CHMP1A-201ENST00000397901 PITX1P78337 314 aaPredicted RBP16.21■□□□□ 0.18
CHMP1A-201ENST00000397901 MRPS22P82650 360 aaKnown RBP16.21■□□□□ 0.18
CHMP1A-201ENST00000397901 KCTD2Q14681 263 aa16.21■□□□□ 0.18
CHMP1A-201ENST00000397901 DCAF6Q58WW2 860 aa16.21■□□□□ 0.18
CHMP1A-201ENST00000397901 GLRA4Q5JXX5 417 aa16.21■□□□□ 0.18
CHMP1A-201ENST00000397901 PID1Q7Z2X4 250 aa16.21■□□□□ 0.18
CHMP1A-201ENST00000397901 GPR141Q7Z602 305 aa16.21■□□□□ 0.18
CHMP1A-201ENST00000397901 ZDHHC17Q8IUH5 632 aa16.21■□□□□ 0.18
CHMP1A-201ENST00000397901 RNF148Q8N7C7 305 aa16.21■□□□□ 0.18
CHMP1A-201ENST00000397901 FAM149B1Q96BN6 582 aa16.21■□□□□ 0.18
CHMP1A-201ENST00000397901 SERPINI1Q99574 410 aa16.21■□□□□ 0.18
CHMP1A-201ENST00000397901 NAT9Q9BTE0 207 aa16.21■□□□□ 0.18
CHMP1A-201ENST00000397901 HIPK3Q9H422 1215 aa16.21■□□□□ 0.18
CHMP1A-201ENST00000397901 PRDM12Q9H4Q4 367 aa16.21■□□□□ 0.18
CHMP1A-201ENST00000397901 EIF2B3Q9NR50 452 aaKnown RBP16.21■□□□□ 0.18
CHMP1A-201ENST00000397901 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.21■□□□□ 0.18
CHMP1A-201ENST00000397901 GNPTGQ9UJJ9 305 aa16.21■□□□□ 0.18
CHMP1A-201ENST00000397901 HES2Q9Y543 173 aa16.21■□□□□ 0.18
CHMP1A-201ENST00000397901 CFLARO15519 480 aa16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 STAU1O95793 577 aaKnown RBP16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 AMHP03971 560 aa16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 SULT1E1P49888 294 aa16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 SNX16P57768 344 aa16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 C16orf87Q6PH81 154 aa16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 CLVS1Q8IUQ0 354 aaPredicted RBP16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 ACVR1CQ8NER5 493 aa16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 AFG1LQ8WV93 481 aa16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 C12orf43Q96C57 262 aaKnown RBP16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 ZNF512Q96ME7 567 aaPredicted RBP16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 ZMAT2Q96NC0 199 aaKnown RBP16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 SPON1Q9HCB6 807 aa16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 EBF1Q9UH73 591 aa16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 PRPF19Q9UMS4 504 aaKnown RBP16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 H0YJX3 145 aa16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 TSPAN1O60635 241 aa16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 EPHA3P29320 983 aa16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 SPRP35270 261 aaPredicted RBP16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 NDST2P52849 883 aa16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 THOP1P52888 689 aa16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 PKNOX1P55347 436 aa16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 SPANXN3Q5MJ09 141 aa16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 HM13Q8TCT9 377 aa16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 RNF139Q8WU17 664 aa16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 C18orf25Q96B23 403 aaPredicted RBP16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 CDRT15Q96T59 188 aa16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 GATA5Q9BWX5 397 aaPredicted RBP16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 DRC3Q9H069 523 aa16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 ERAP1Q9NZ08 941 aa16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 EPS15L1Q9UBC2 864 aa16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 FZD10Q9ULW2 581 aa16.2■□□□□ 0.18
CHMP1A-201ENST00000397901 CITO14578 2027 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 PSMD12O00232 456 aaPredicted RBP16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 TRIM13O60858 407 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 CYP2C9P11712 490 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 XRCC1P18887 633 aaPredicted RBP16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 SAT1P21673 171 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 SLC26A2P50443 739 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 LIMK2P53671 638 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 BST2Q10589 180 aaKnown RBP16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 C9orf131Q5VYM1 1079 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 NANOGP8Q6NSW7 305 aa16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 USP50Q70EL3 339 aaPredicted RBP16.19■□□□□ 0.18
CHMP1A-201ENST00000397901 DEFB106AQ8N104 65 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms