RNA–Protein interactions for RNA: ENST00000397760.8

PDLIM2-204, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-204ENST00000397760 POU3F3P20264 500 aaPredicted RBP19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 IL9RQ01113 521 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 RIPK1Q13546 671 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 GALNTL6Q49A17 601 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 FAM78AQ5JUQ0 283 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 MPP7Q5T2T1 576 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 CXorf57Q6NSI4 855 aaKnown RBP19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 OR7D4Q8NG98 312 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 USP33Q8TEY7 942 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 ASB16Q96NS5 453 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 AGAP3Q96P47 875 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 LINC00597Q9H2U6 94 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 SP110Q9HB58 689 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 CTNNAL1Q9UBT7 734 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 PRKAG3Q9UGI9 489 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 SLC24A2Q9UI40 661 aa19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 SMG5Q9UPR3 1016 aaKnown RBP19.67■□□□□ 0.74
PDLIM2-204ENST00000397760 DOCK4Q8N1I0 1966 aa19.66■□□□□ 0.74
PDLIM2-204ENST00000397760 FAM47DPA6NHR8 397 aa19.66■□□□□ 0.74
PDLIM2-204ENST00000397760 CYBBP04839 570 aa19.66■□□□□ 0.74
PDLIM2-204ENST00000397760 VIPR2P41587 438 aa19.66■□□□□ 0.74
PDLIM2-204ENST00000397760 ANO4Q32M45 955 aa19.66■□□□□ 0.74
PDLIM2-204ENST00000397760 ANKRD22Q5VYY1 191 aa19.66■□□□□ 0.74
PDLIM2-204ENST00000397760 RGS9BPQ6ZS82 235 aa19.66■□□□□ 0.74
PDLIM2-204ENST00000397760 SPATA21Q7Z572 469 aa19.66■□□□□ 0.74
PDLIM2-204ENST00000397760 NAT8LQ8N9F0 302 aa19.66■□□□□ 0.74
PDLIM2-204ENST00000397760 PRCCQ92733 491 aaPredicted RBP19.66■□□□□ 0.74
PDLIM2-204ENST00000397760 SMARCD2Q92925 531 aa19.66■□□□□ 0.74
PDLIM2-204ENST00000397760 SPON2Q9BUD6 331 aa19.66■□□□□ 0.74
PDLIM2-204ENST00000397760 FGFR1OP2Q9NVK5 253 aa19.66■□□□□ 0.74
PDLIM2-204ENST00000397760 PLK2Q9NYY3 685 aa19.66■□□□□ 0.74
PDLIM2-204ENST00000397760 NUP205Q92621 2012 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 TCRBV7S3A2A0A539 114 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 ZBTB24O43167 697 aaPredicted RBP19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 CREB1P16220 341 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 HOXD9P28356 352 aaPredicted RBP19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 SLC8A1P32418 973 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 FDFT1P37268 417 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 NUMBP49757 651 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 IL10RBQ08334 325 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 CDH18Q13634 790 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 LRRC14Q15048 493 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 PARP6Q2NL67 630 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 FSCBQ5H9T9 825 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 RNF219Q5W0B1 726 aaPredicted RBP19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 RNF43Q68DV7 783 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 IL31Q6EBC2 164 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 CENPUQ71F23 418 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 TRABD2AQ86V40 505 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 MFN1Q8IWA4 741 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 CYP4X1Q8N118 509 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 CCDC63Q8NA47 563 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 FATE1Q969F0 183 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 C9orf72Q96LT7 481 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 TEKT5Q96M29 485 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 LRRC3BQ96PB8 259 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 IL12RB2Q99665 862 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 SSU72Q9NP77 194 aaKnown RBP19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 SAYSD1Q9NPB0 183 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 DNAJC17Q9NVM6 304 aaKnown RBP19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 WNT6Q9Y6F9 365 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 EXOC1LA0A1B0GW35 172 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 F5H423 210 aaPredicted RBP19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 SOX1O00570 391 aaPredicted RBP19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 SLC9A3R1O14745 358 aaPredicted RBP19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 CHADO15335 359 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 PEX11BO96011 259 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 CCDC15Q0P6D6 951 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 MPP2Q14168 576 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 KCNJ11Q14654 390 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 SYCP2LQ5T4T6 812 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 ZNF783Q6ZMS7 281 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 TMEM25Q86YD3 366 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 CCDC117Q8IWD4 279 aaPredicted RBP19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 SRRM1Q8IYB3 904 aaKnown RBP19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 ANKRD42Q8N9B4 389 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 NSMCE1Q8WV22 266 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 OTUB2Q96DC9 234 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 PABPC5Q96DU9 382 aaKnown RBP19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 RSPRY1Q96DX4 576 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 FAM161BQ96MY7 647 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 PWWP2AQ96N64 755 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 MUC3BQ9H195 1237 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 IGSF9Q9P2J2 1179 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 CDH7Q9ULB5 785 aa19.65■□□□□ 0.74
PDLIM2-204ENST00000397760 GOLGA8MH3BSY2 632 aa19.64■□□□□ 0.73
PDLIM2-204ENST00000397760 PRAMEF11O60813 436 aa19.64■□□□□ 0.73
PDLIM2-204ENST00000397760 TSHRP16473 764 aa19.64■□□□□ 0.73
PDLIM2-204ENST00000397760 PSMB4P28070 264 aa19.64■□□□□ 0.73
PDLIM2-204ENST00000397760 CD68P34810 354 aaPredicted RBP19.64■□□□□ 0.73
PDLIM2-204ENST00000397760 LTBRP36941 435 aa19.64■□□□□ 0.73
PDLIM2-204ENST00000397760 ETFBP38117 255 aa19.64■□□□□ 0.73
PDLIM2-204ENST00000397760 SKIV2L2P42285 1042 aaKnown RBP19.64■□□□□ 0.73
PDLIM2-204ENST00000397760 ELF3P78545 371 aaPredicted RBP19.64■□□□□ 0.73
PDLIM2-204ENST00000397760 SEMA5AQ13591 1074 aa19.64■□□□□ 0.73
PDLIM2-204ENST00000397760 HNRNPDQ14103 355 aaKnown RBP19.64■□□□□ 0.73
PDLIM2-204ENST00000397760 FYB2Q5VWT5 728 aa19.64■□□□□ 0.73
PDLIM2-204ENST00000397760 ITPRIPL1Q6GPH6 555 aa19.64■□□□□ 0.73
PDLIM2-204ENST00000397760 CCDC91Q7Z6B0 441 aa19.64■□□□□ 0.73
PDLIM2-204ENST00000397760 CNTD1Q8N815 330 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms