RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 ADRB3P13945 408 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 RRM1P23921 792 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 SLC5A2P31639 672 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 PRCPP42785 496 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 INHBCP55103 352 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 GCNT1Q02742 428 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 EIF2B5Q13144 721 aaKnown RBP15.28■□□□□ 0.04
SEC13-206ENST00000397102 COBLL1Q53SF7 1204 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 TPRG1LQ5T0D9 272 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 ANKRD40Q6AI12 368 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 C22orf39Q6P5X5 142 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 RRAGAQ7L523 313 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 SLC35F3Q8IY50 421 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 DEFB106AQ8N104 65 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 DCAF4L2Q8NA75 395 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 LMO3Q8TAP4 145 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 EXTL1Q92935 676 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 SPATA32Q96LK8 384 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 TBATAQ96M53 351 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 LENG8Q96PV6 779 aaPredicted RBP15.28■□□□□ 0.04
SEC13-206ENST00000397102 SLC2A13Q96QE2 648 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 KLF6Q99612 283 aaPredicted RBP15.28■□□□□ 0.04
SEC13-206ENST00000397102 SEMA3CQ99985 751 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 CCDC3Q9BQI4 270 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 COX16Q9P0S2 106 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 FADS3Q9Y5Q0 445 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 WASF2Q9Y6W5 498 aa15.28■□□□□ 0.04
SEC13-206ENST00000397102 CASC3O15234 703 aaKnown RBP15.27■□□□□ 0.04
SEC13-206ENST00000397102 SPINT1O43278 529 aa15.27■□□□□ 0.04
SEC13-206ENST00000397102 MED7O43513 233 aa15.27■□□□□ 0.04
SEC13-206ENST00000397102 AP1G1O43747 822 aa15.27■□□□□ 0.04
SEC13-206ENST00000397102 NOBOXO60393 691 aa15.27■□□□□ 0.04
SEC13-206ENST00000397102 NTRK1P04629 796 aa15.27■□□□□ 0.04
SEC13-206ENST00000397102 RHOCP08134 193 aa15.27■□□□□ 0.04
SEC13-206ENST00000397102 GLI1P08151 1106 aa15.27■□□□□ 0.04
SEC13-206ENST00000397102 ITGB7P26010 798 aa15.27■□□□□ 0.04
SEC13-206ENST00000397102 GGCXP38435 758 aa15.27■□□□□ 0.04
SEC13-206ENST00000397102 RECQLP46063 649 aaPredicted RBP15.27■□□□□ 0.04
SEC13-206ENST00000397102 PFN3P60673 137 aa15.27■□□□□ 0.04
SEC13-206ENST00000397102 PKP1Q13835 747 aa15.27■□□□□ 0.04
SEC13-206ENST00000397102 TAF5Q15542 800 aa15.27■□□□□ 0.04
SEC13-206ENST00000397102 DPY19L3Q6ZPD9 716 aa15.27■□□□□ 0.04
SEC13-206ENST00000397102 C14orf80Q86SX3 495 aa15.27■□□□□ 0.04
SEC13-206ENST00000397102 ARHGEF19Q8IW93 802 aa15.27■□□□□ 0.04
SEC13-206ENST00000397102 RBFAQ8N0V3 343 aa15.27■□□□□ 0.04
SEC13-206ENST00000397102 FBXO39Q8N4B4 442 aa15.27■□□□□ 0.04
SEC13-206ENST00000397102 DENND6BQ8NEG7 585 aa15.27■□□□□ 0.04
SEC13-206ENST00000397102 SYNDIG1Q9H7V2 258 aa15.27■□□□□ 0.04
SEC13-206ENST00000397102 APOBEC3BQ9UH17 382 aaKnown RBP15.27■□□□□ 0.04
SEC13-206ENST00000397102 CNTN6Q9UQ52 1028 aa15.27■□□□□ 0.04
SEC13-206ENST00000397102 AHCTF1Q8WYP5 2266 aa15.26■□□□□ 0.03
SEC13-206ENST00000397102 LMO7DNF2Z398 122 aa15.26■□□□□ 0.03
SEC13-206ENST00000397102 TMX2-CTNND1H3BSU7 103 aa15.26■□□□□ 0.03
SEC13-206ENST00000397102 P4HA2O15460 535 aa15.26■□□□□ 0.03
SEC13-206ENST00000397102 GCATO75600 419 aa15.26■□□□□ 0.03
SEC13-206ENST00000397102 CNTN5O94779 1100 aa15.26■□□□□ 0.03
SEC13-206ENST00000397102 AFPP02771 609 aaKnown RBP15.26■□□□□ 0.03
SEC13-206ENST00000397102 ANXA6P08133 673 aa15.26■□□□□ 0.03
SEC13-206ENST00000397102 LIPCP11150 499 aa15.26■□□□□ 0.03
SEC13-206ENST00000397102 L1CAMP32004 1257 aa15.26■□□□□ 0.03
SEC13-206ENST00000397102 UGT1A5P35504 534 aa15.26■□□□□ 0.03
SEC13-206ENST00000397102 PMS1P54277 932 aaKnown RBP15.26■□□□□ 0.03
SEC13-206ENST00000397102 ADKP55263 362 aaKnown RBP15.26■□□□□ 0.03
SEC13-206ENST00000397102 LRRC63Q05C16 580 aa15.26■□□□□ 0.03
SEC13-206ENST00000397102 CETN1Q12798 172 aa15.26■□□□□ 0.03
SEC13-206ENST00000397102 SGCGQ13326 291 aa15.26■□□□□ 0.03
SEC13-206ENST00000397102 TGIF1Q15583 401 aa15.26■□□□□ 0.03
SEC13-206ENST00000397102 PRRT3Q5FWE3 981 aa15.26■□□□□ 0.03
SEC13-206ENST00000397102 LINGO4Q6UY18 593 aa15.26■□□□□ 0.03
SEC13-206ENST00000397102 RAB11FIP2Q7L804 512 aa15.26■□□□□ 0.03
SEC13-206ENST00000397102 SETD3Q86TU7 594 aaPredicted RBP15.26■□□□□ 0.03
SEC13-206ENST00000397102 ASB12Q8WXK4 309 aa15.26■□□□□ 0.03
SEC13-206ENST00000397102 C1QTNF2Q9BXJ5 285 aa15.26■□□□□ 0.03
SEC13-206ENST00000397102 TNKS2Q9H2K2 1166 aa15.26■□□□□ 0.03
SEC13-206ENST00000397102 TCEAL2Q9H3H9 227 aaPredicted RBP15.26■□□□□ 0.03
SEC13-206ENST00000397102 EPB41L5Q9HCM4 733 aa15.26■□□□□ 0.03
SEC13-206ENST00000397102 ASNSD1Q9NWL6 643 aa15.26■□□□□ 0.03
SEC13-206ENST00000397102 PADI4Q9UM07 663 aa15.26■□□□□ 0.03
SEC13-206ENST00000397102 TRIM49BA6NDI0 452 aa15.25■□□□□ 0.03
SEC13-206ENST00000397102 HSF2BPO75031 334 aa15.25■□□□□ 0.03
SEC13-206ENST00000397102 PAGE1O75459 146 aa15.25■□□□□ 0.03
SEC13-206ENST00000397102 ZNF202O95125 648 aa15.25■□□□□ 0.03
SEC13-206ENST00000397102 FAM87AP0C7U9 286 aa15.25■□□□□ 0.03
SEC13-206ENST00000397102 C1QBPQ07021 282 aaKnown RBP15.25■□□□□ 0.03
SEC13-206ENST00000397102 SRSF6Q13247 344 aaKnown RBP15.25■□□□□ 0.03
SEC13-206ENST00000397102 PDCLQ13371 301 aa15.25■□□□□ 0.03
SEC13-206ENST00000397102 C1orf61Q13536 156 aa15.25■□□□□ 0.03
SEC13-206ENST00000397102 PTK2BQ14289 1009 aa15.25■□□□□ 0.03
SEC13-206ENST00000397102 ALFQ53S48 1182 aa15.25■□□□□ 0.03
SEC13-206ENST00000397102 EFHC1Q5JVL4 640 aa15.25■□□□□ 0.03
SEC13-206ENST00000397102 ZNF658Q5TYW1 1059 aaPredicted RBP15.25■□□□□ 0.03
SEC13-206ENST00000397102 ESRP1Q6NXG1 681 aaKnown RBP15.25■□□□□ 0.03
SEC13-206ENST00000397102 B3GNT8Q7Z7M8 397 aa15.25■□□□□ 0.03
SEC13-206ENST00000397102 JAMLQ86YT9 394 aa15.25■□□□□ 0.03
SEC13-206ENST00000397102 PHACTR4Q8IZ21 702 aa15.25■□□□□ 0.03
SEC13-206ENST00000397102 ZNF606Q8WXB4 792 aa15.25■□□□□ 0.03
SEC13-206ENST00000397102 CCDC34Q96HJ3 373 aa15.25■□□□□ 0.03
SEC13-206ENST00000397102 KREMEN1Q96MU8 473 aa15.25■□□□□ 0.03
SEC13-206ENST00000397102 HEPHQ9BQS7 1158 aa15.25■□□□□ 0.03
SEC13-206ENST00000397102 LRRC61Q9BV99 259 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms