RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 C1orf232A0A0U1RR37 186 aa9.98□□□□□ -0.81
TRIM39-203ENST00000396547 TCAF2A6NFQ2 919 aa9.98□□□□□ -0.81
TRIM39-203ENST00000396547 ACOT8O14734 319 aa9.98□□□□□ -0.81
TRIM39-203ENST00000396547 HTRA2O43464 458 aaPredicted RBP9.98□□□□□ -0.81
TRIM39-203ENST00000396547 PIGRP01833 764 aa9.98□□□□□ -0.81
TRIM39-203ENST00000396547 VDRP11473 427 aa9.98□□□□□ -0.81
TRIM39-203ENST00000396547 ALOX15P16050 662 aaPredicted RBP9.98□□□□□ -0.81
TRIM39-203ENST00000396547 CTBSQ01459 385 aa9.98□□□□□ -0.81
TRIM39-203ENST00000396547 GNA12Q03113 381 aa9.98□□□□□ -0.81
TRIM39-203ENST00000396547 GRM3Q14832 879 aa9.98□□□□□ -0.81
TRIM39-203ENST00000396547 GRTP1Q5TC63 336 aa9.98□□□□□ -0.81
TRIM39-203ENST00000396547 METTL21CQ5VZV1 264 aa9.98□□□□□ -0.81
TRIM39-203ENST00000396547 ZNF280DQ6N043 979 aa9.98□□□□□ -0.81
TRIM39-203ENST00000396547 SLC41A1Q8IVJ1 513 aa9.98□□□□□ -0.81
TRIM39-203ENST00000396547 CANT1Q8WVQ1 401 aa9.98□□□□□ -0.81
TRIM39-203ENST00000396547 RTP4Q96DX8 246 aa9.98□□□□□ -0.81
TRIM39-203ENST00000396547 CPNE1Q99829 537 aa9.98□□□□□ -0.81
TRIM39-203ENST00000396547 OSBPL11Q9BXB4 747 aa9.98□□□□□ -0.81
TRIM39-203ENST00000396547 PRDM12Q9H4Q4 367 aa9.98□□□□□ -0.81
TRIM39-203ENST00000396547 CXorf21Q9HAI6 301 aa9.98□□□□□ -0.81
TRIM39-203ENST00000396547 PNPLA3Q9NST1 481 aa9.98□□□□□ -0.81
TRIM39-203ENST00000396547 BARX2Q9UMQ3 279 aaPredicted RBP9.98□□□□□ -0.81
TRIM39-203ENST00000396547 PRORSD1PA6NEY8 169 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 GPR25O00155 361 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 UGT1A1P22309 533 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 UGT1A4P22310 534 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 UGT1A3P35503 534 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 UGT1A5P35504 534 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 HMGCS2P54868 508 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 ENPEPQ07075 957 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 TRIM25Q14258 630 aaKnown RBP9.97□□□□□ -0.81
TRIM39-203ENST00000396547 PPP1R3AQ16821 1122 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 KIZQ2M2Z5 673 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 MFSD4BQ5TF39 518 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 Q6ZNX1 250 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 CHSY3Q70JA7 882 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.97□□□□□ -0.81
TRIM39-203ENST00000396547 CNDP1Q96KN2 507 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 RBBP8Q99708 897 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 PIF1Q9H611 641 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 BFARQ9NZS9 450 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 SYNPO2Q9UMS6 1093 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 MANSC4A6NHS7 340 aaPredicted RBP9.97□□□□□ -0.81
TRIM39-203ENST00000396547 K7EPI3 171 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 KCNH1O95259 989 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 PHEXP78562 749 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 RELAQ04206 551 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 INSCQ1MX18 579 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 DCAF6Q58WW2 860 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 STXBP5Q5T5C0 1151 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 SPRYD7Q5W111 196 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 MPZL3Q6UWV2 235 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 ZPBP2Q6X784 338 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 OR6B3Q8NGW1 331 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 USP33Q8TEY7 942 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 DLG3Q92796 817 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 GFM2Q969S9 779 aaKnown RBP9.97□□□□□ -0.81
TRIM39-203ENST00000396547 ABHD8Q96I13 439 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 FBXL20Q96IG2 436 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 VPS39Q96JC1 886 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 COX4I2Q96KJ9 171 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 SLC2A11Q9BYW1 496 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 TMEM134Q9H6X4 195 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 DOCK5Q9H7D0 1870 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 MINDY3Q9H8M7 445 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 ZBTB26Q9HCK0 441 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 OXSMQ9NWU1 459 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 HESX1Q9UBX0 185 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 TUBGCP4Q9UGJ1 667 aa9.97□□□□□ -0.81
TRIM39-203ENST00000396547 HEATR9A2RTY3 570 aa9.96□□□□□ -0.81
TRIM39-203ENST00000396547 STAG3L1P0CL83 205 aa9.96□□□□□ -0.81
TRIM39-203ENST00000396547 ZNF182P17025 639 aaPredicted RBP9.96□□□□□ -0.81
TRIM39-203ENST00000396547 EIF2B2P49770 351 aaKnown RBP9.96□□□□□ -0.81
TRIM39-203ENST00000396547 KPNA1P52294 538 aaPredicted RBP9.96□□□□□ -0.81
TRIM39-203ENST00000396547 SLC7A2P52569 658 aa9.96□□□□□ -0.81
TRIM39-203ENST00000396547 SLC6A3Q01959 620 aa9.96□□□□□ -0.81
TRIM39-203ENST00000396547 PRKCQQ04759 706 aa9.96□□□□□ -0.81
TRIM39-203ENST00000396547 PPIL2Q13356 520 aa9.96□□□□□ -0.81
TRIM39-203ENST00000396547 CTBP1Q13363 440 aa9.96□□□□□ -0.81
TRIM39-203ENST00000396547 LY6KQ17RY6 165 aa9.96□□□□□ -0.81
TRIM39-203ENST00000396547 NCBP2-AS2Q69YL0 99 aa9.96□□□□□ -0.81
TRIM39-203ENST00000396547 UTS2BQ765I0 119 aa9.96□□□□□ -0.81
TRIM39-203ENST00000396547 SETD3Q86TU7 594 aaPredicted RBP9.96□□□□□ -0.81
TRIM39-203ENST00000396547 CROCCP3Q8IVE0 287 aa9.96□□□□□ -0.81
TRIM39-203ENST00000396547 ZNF567Q8N184 647 aa9.96□□□□□ -0.81
TRIM39-203ENST00000396547 PHF21BQ96EK2 531 aa9.96□□□□□ -0.81
TRIM39-203ENST00000396547 RANBP9Q96S59 729 aa9.96□□□□□ -0.81
TRIM39-203ENST00000396547 ZNF670Q9BS34 389 aa9.96□□□□□ -0.81
TRIM39-203ENST00000396547 NT5C1AQ9BXI3 368 aa9.96□□□□□ -0.81
TRIM39-203ENST00000396547 MAF1Q9H063 256 aa9.96□□□□□ -0.81
TRIM39-203ENST00000396547 XPR1Q9UBH6 696 aa9.96□□□□□ -0.81
TRIM39-203ENST00000396547 VANGL2Q9ULK5 521 aa9.96□□□□□ -0.81
TRIM39-203ENST00000396547 CNOT6Q9ULM6 557 aaKnown RBP9.96□□□□□ -0.81
TRIM39-203ENST00000396547 SPATA31C2B4DYI2 1134 aa9.96□□□□□ -0.82
TRIM39-203ENST00000396547 C9IYK1 514 aa9.96□□□□□ -0.82
TRIM39-203ENST00000396547 ALDH1A2O94788 518 aa9.96□□□□□ -0.82
TRIM39-203ENST00000396547 CCDC130P13994 396 aa9.96□□□□□ -0.82
TRIM39-203ENST00000396547 HMOX2P30519 316 aa9.96□□□□□ -0.82
TRIM39-203ENST00000396547 TMED10P49755 219 aaKnown RBP9.96□□□□□ -0.82
TRIM39-203ENST00000396547 PITX1P78337 314 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms