RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 OLA1Q9NTK5 396 aaKnown RBP17.03■□□□□ 0.32
NUP50-202ENST00000396096 TLK1Q9UKI8 766 aa17.03■□□□□ 0.32
NUP50-202ENST00000396096 GREB1Q4ZG55 1949 aa17.02■□□□□ 0.32
NUP50-202ENST00000396096 E2F8A0AVK6 867 aa17.02■□□□□ 0.32
NUP50-202ENST00000396096 PRR5-ARHGAP8B1AHC4 643 aa17.02■□□□□ 0.32
NUP50-202ENST00000396096 ENTPD5O75356 428 aa17.02■□□□□ 0.32
NUP50-202ENST00000396096 AHSGP02765 367 aa17.02■□□□□ 0.32
NUP50-202ENST00000396096 GRK4P32298 578 aa17.02■□□□□ 0.32
NUP50-202ENST00000396096 ARHGAP8P85298 464 aa17.02■□□□□ 0.32
NUP50-202ENST00000396096 TRIP4Q15650 581 aaPredicted RBP17.02■□□□□ 0.32
NUP50-202ENST00000396096 CTXN3Q4LDR2 81 aa17.02■□□□□ 0.32
NUP50-202ENST00000396096 MS4A13Q5J8X5 152 aa17.02■□□□□ 0.32
NUP50-202ENST00000396096 ACBD5Q5T8D3 534 aaPredicted RBP17.02■□□□□ 0.32
NUP50-202ENST00000396096 ESRP1Q6NXG1 681 aaKnown RBP17.02■□□□□ 0.32
NUP50-202ENST00000396096 ZYG11AQ6WRX3 759 aa17.02■□□□□ 0.32
NUP50-202ENST00000396096 TMEM151AQ8N4L1 468 aa17.02■□□□□ 0.32
NUP50-202ENST00000396096 ATP6V0D2Q8N8Y2 350 aa17.02■□□□□ 0.32
NUP50-202ENST00000396096 NSMCE1Q8WV22 266 aa17.02■□□□□ 0.32
NUP50-202ENST00000396096 IMP4Q96G21 291 aaKnown RBP17.02■□□□□ 0.32
NUP50-202ENST00000396096 RANBP9Q96S59 729 aa17.02■□□□□ 0.32
NUP50-202ENST00000396096 FSD1LQ9BXM9 530 aa17.02■□□□□ 0.32
NUP50-202ENST00000396096 UBE2OQ9C0C9 1292 aaKnown RBP17.02■□□□□ 0.32
NUP50-202ENST00000396096 OXSMQ9NWU1 459 aa17.02■□□□□ 0.32
NUP50-202ENST00000396096 COMMD8Q9NX08 183 aa17.02■□□□□ 0.32
NUP50-202ENST00000396096 PLA2G4CQ9UP65 541 aa17.02■□□□□ 0.32
NUP50-202ENST00000396096 MIA3Q5JRA6 1907 aa17.02■□□□□ 0.32
NUP50-202ENST00000396096 GOLGA8TH3BQL2 631 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 DIAPH2O60879 1101 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 PMPCBO75439 489 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 RTN3O95197 1032 aaPredicted RBP17.01■□□□□ 0.31
NUP50-202ENST00000396096 PAMP19021 973 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 PGM1P36871 562 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 PSEN1P49768 467 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 RENBPP51606 427 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 SLC12A1Q13621 1099 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 DNAL1Q4LDG9 190 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 ZNF280DQ6N043 979 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 NAPRTQ6XQN6 538 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.01■□□□□ 0.31
NUP50-202ENST00000396096 RBM15BQ8NDT2 890 aaKnown RBP17.01■□□□□ 0.31
NUP50-202ENST00000396096 CDH19Q9H159 772 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 VPS45Q9NRW7 570 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.01■□□□□ 0.31
NUP50-202ENST00000396096 PCNTO95613 3336 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 A0A1W2PQ45 241 aaPredicted RBP17.01■□□□□ 0.31
NUP50-202ENST00000396096 A0A1W2PQY0 241 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 VGLL3A8MV65 326 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.01■□□□□ 0.31
NUP50-202ENST00000396096 NEBLO76041 1014 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 VAPBO95292 243 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 IGLV3-27P01718 113 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 SLC35E2BP0CK96 405 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 FGFR3P22607 806 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 YWHAQP27348 245 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 HOXD10P28358 340 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 WNT3AP56704 352 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 UBAP2LQ14157 1087 aaKnown RBP17.01■□□□□ 0.31
NUP50-202ENST00000396096 USP10Q14694 798 aaKnown RBP17.01■□□□□ 0.31
NUP50-202ENST00000396096 TEX26Q8N6G2 289 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 C2CD4AQ8NCU7 369 aaPredicted RBP17.01■□□□□ 0.31
NUP50-202ENST00000396096 STON2Q8WXE9 905 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 BTN2A3PQ96KV6 586 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 TSNARE1Q96NA8 513 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 FAM167BQ9BTA0 163 aa17.01■□□□□ 0.31
NUP50-202ENST00000396096 ACE2Q9BYF1 805 aaPredicted RBP17.01■□□□□ 0.31
NUP50-202ENST00000396096 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.01■□□□□ 0.31
NUP50-202ENST00000396096 DRGXA6NNA5 263 aa17■□□□□ 0.31
NUP50-202ENST00000396096 HSPA4LO95757 839 aa17■□□□□ 0.31
NUP50-202ENST00000396096 SBK3P0C264 359 aa17■□□□□ 0.31
NUP50-202ENST00000396096 GCKP35557 465 aa17■□□□□ 0.31
NUP50-202ENST00000396096 CPA2P48052 419 aa17■□□□□ 0.31
NUP50-202ENST00000396096 HK2P52789 917 aa17■□□□□ 0.31
NUP50-202ENST00000396096 EFEMP1Q12805 493 aa17■□□□□ 0.31
NUP50-202ENST00000396096 NOGQ13253 232 aa17■□□□□ 0.31
NUP50-202ENST00000396096 RCN2Q14257 317 aa17■□□□□ 0.31
NUP50-202ENST00000396096 KHDC1Q4VXA5 237 aaKnown RBP17■□□□□ 0.31
NUP50-202ENST00000396096 EPGNQ6UW88 154 aa17■□□□□ 0.31
NUP50-202ENST00000396096 FAM43BQ6ZT52 329 aaPredicted RBP17■□□□□ 0.31
NUP50-202ENST00000396096 KIAA0408Q6ZU52 694 aa17■□□□□ 0.31
NUP50-202ENST00000396096 RAPH1Q70E73 1250 aa17■□□□□ 0.31
NUP50-202ENST00000396096 PXYLP1Q8TE99 480 aa17■□□□□ 0.31
NUP50-202ENST00000396096 STYXQ8WUJ0 223 aa17■□□□□ 0.31
NUP50-202ENST00000396096 FBXO32Q969P5 355 aa17■□□□□ 0.31
NUP50-202ENST00000396096 HMCESQ96FZ2 354 aa17■□□□□ 0.31
NUP50-202ENST00000396096 SPATA17Q96L03 361 aa17■□□□□ 0.31
NUP50-202ENST00000396096 GATA5Q9BWX5 397 aaPredicted RBP17■□□□□ 0.31
NUP50-202ENST00000396096 TASP1Q9H6P5 420 aa17■□□□□ 0.31
NUP50-202ENST00000396096 ZNF212Q9UDV6 495 aa17■□□□□ 0.31
NUP50-202ENST00000396096 CCDC78A2IDD5 438 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 TARM1B6A8C7 271 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 TM7SF2O76062 418 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 CRABP2P29373 138 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 RAB10P61026 200 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 MPP1Q00013 466 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 KDSRQ06136 332 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 SMARCB1Q12824 385 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 CNGA3Q16281 694 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 FAM171A1Q5VUB5 890 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 LIPMQ5VYY2 423 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 LHX8Q68G74 356 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms