RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 PRKD2Q9BZL6 878 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 UPF3AQ9H1J1 476 aaKnown RBP10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 CAB39LQ9H9S4 337 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 CNGB3Q9NQW8 809 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 NME7Q9Y5B8 376 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 NRCAMQ92823 1304 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 HEATR9A2RTY3 570 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 TK2O00142 265 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 PPEF2O14830 753 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 ZBTB24O43167 697 aaPredicted RBP10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 RECQL4O94761 1208 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 LTFP02788 710 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 ATP4BP51164 291 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 GEMP55040 296 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 TXNL4AP83876 142 aaKnown RBP10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 GALNT1Q10472 559 aaPredicted RBP10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 CEACAM7Q14002 265 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 KIZQ2M2Z5 673 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 MAP7D1Q3KQU3 841 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 PABPC1LQ4VXU2 614 aaKnown RBP10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 CERCAMQ5T4B2 595 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 PKN3Q6P5Z2 889 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 KIAA0408Q6ZU52 694 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 SLC22A9Q8IVM8 553 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 FSTL5Q8N475 847 aaPredicted RBP10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 SHKBP1Q8TBC3 707 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 HM13Q8TCT9 377 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 AGR3Q8TD06 166 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 CALML6Q8TD86 181 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 ZMAT2Q96NC0 199 aaKnown RBP10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 PRPF18Q99633 342 aaKnown RBP10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 MED10Q9BTT4 135 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 TRMOQ9BU70 441 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 SLC25A23Q9BV35 468 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 ADA2Q9NZK5 511 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 AP4S1Q9Y587 144 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 MYO18AQ92614 2054 aaKnown RBP10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 PAPPA2Q9BXP8 1791 aa10.18□□□□□ -0.78
UBE2D3-208ENST00000394803 SYNJ2BP-COX16A0A087WUM0 186 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 ACOT8O14734 319 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 VILLO15195 856 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 SLC35E2BP0CK96 405 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 CCDC166P0CW27 439 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 ETS2P15036 469 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 PSME3P61289 254 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 RHDQ02161 417 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 FAM83EQ2M2I3 478 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 SPATS1Q496A3 300 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 SAMD4BQ5PRF9 694 aaKnown RBP10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 OTUD1Q5VV17 481 aaPredicted RBP10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 KRT80Q6KB66 452 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 CROCCP3Q8IVE0 287 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 LZTR1Q8N653 840 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 PACRGLQ8N7B6 248 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 EFCAB3Q8N7B9 438 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 TRIML2Q8N7C3 387 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 TRPM4Q8TD43 1214 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 TMA16Q96EY4 203 aaKnown RBP10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 ZNF597Q96LX8 424 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 APBA2Q99767 749 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 PKP2Q99959 881 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 TBL1YQ9BQ87 522 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 SGIP1Q9BQI5 828 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 C16orf70Q9BSU1 422 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 RBM38Q9H0Z9 239 aaKnown RBP10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 SPAG4Q9NPE6 437 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 PNPLA3Q9NST1 481 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 COX16Q9P0S2 106 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 XPR1Q9UBH6 696 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 ZDHHC2Q9UIJ5 367 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 SARDHQ9UL12 918 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 NR2E3Q9Y5X4 410 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 COPG1Q9Y678 874 aaKnown RBP10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 AK5Q9Y6K8 562 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 E2F8A0AVK6 867 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 ARHGEF37A1IGU5 675 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 BBIP1A8MTZ0 92 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 TARM1B6A8C7 271 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 USP12O75317 370 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 GPC4O75487 556 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 SRP72O76094 671 aaKnown RBP10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 RBP1P09455 135 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 YBX3P16989 372 aaKnown RBP eCLIP10.17□□□□□ -0.781e-8■■□□□ 14.5
UBE2D3-208ENST00000394803 ZNF23P17027 643 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 PTPN1P18031 435 aaKnown RBP10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 CCNCP24863 283 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 LMO2P25791 158 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 SLC7A1P30825 629 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 PKNOX1P55347 436 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 STX1BP61266 288 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 MYBPC1Q00872 1141 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 PDAP1Q13442 181 aaKnown RBP10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 PPP2R5DQ14738 602 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 DLG2Q15700 870 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 GLRA4Q5JXX5 417 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 PPM1LQ5SGD2 360 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 FAM182AQ5T1J6 154 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 AGAP9Q5VTM2 703 aa10.17□□□□□ -0.78
UBE2D3-208ENST00000394803 FAM45BPQ6NSW5 357 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms