RNA–Protein interactions for RNA: ENST00000393104.6

PDCD4-202, Transcript of programmed cell death 4, humanhuman

TSL 1 (best) BASIC

Gene PDCD4, Length 3,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-202ENST00000393104 APBA2Q99767 749 aa11.59□□□□□ -0.55
PDCD4-202ENST00000393104 GCOM2Q9BZD3 368 aaPredicted RBP11.59□□□□□ -0.55
PDCD4-202ENST00000393104 OSBPL6Q9BZF3 934 aa11.59□□□□□ -0.55
PDCD4-202ENST00000393104 SLC52A3Q9NQ40 469 aa11.59□□□□□ -0.55
PDCD4-202ENST00000393104 IGSF9Q9P2J2 1179 aa11.59□□□□□ -0.55
PDCD4-202ENST00000393104 ARHGAP10A1A4S6 786 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 DLX3O60479 287 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 TRIM13O60858 407 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 USP12O75317 370 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 PGK1P00558 417 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 VDRP11473 427 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 PORP16435 677 aaPredicted RBP11.58□□□□□ -0.55
PDCD4-202ENST00000393104 UGT1A6P19224 532 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 KCNA5P22460 613 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 RXRGP48443 463 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 SH3BGRP55822 239 aaPredicted RBP11.58□□□□□ -0.55
PDCD4-202ENST00000393104 TUBA4AP68366 448 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 SLC6A3Q01959 620 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 RALGDSQ12967 914 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 PMS2P3Q13401 168 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 PPP1R3AQ16821 1122 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 DCAF6Q58WW2 860 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 WDR78Q5VTH9 848 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 CNSTQ6PJW8 725 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 ZYG11AQ6WRX3 759 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 FUNDC1Q8IVP5 155 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 STYXQ8WUJ0 223 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 LRGUKQ96M69 825 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 CSF3RQ99062 836 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 TBCBQ99426 244 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 CIB1Q99828 191 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 CPNE1Q99829 537 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 RRAGCQ9HB90 399 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 TMEM181Q9P2C4 612 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 SUCOQ9UBS9 1254 aaKnown RBP11.58□□□□□ -0.55
PDCD4-202ENST00000393104 CLEC11AQ9Y240 323 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 RAP2CQ9Y3L5 183 aa11.58□□□□□ -0.55
PDCD4-202ENST00000393104 A0A096LPK6 155 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 PRKCBP05771 671 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 TYK2P29597 1187 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 RPL14P50914 215 aaKnown RBP11.58□□□□□ -0.56
PDCD4-202ENST00000393104 RELAQ04206 551 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 PRKCQQ04759 706 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 SFSWAPQ12872 951 aaKnown RBP11.58□□□□□ -0.56
PDCD4-202ENST00000393104 TRIM25Q14258 630 aaKnown RBP11.58□□□□□ -0.56
PDCD4-202ENST00000393104 FGD3Q5JSP0 725 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 DCDC5Q6ZRR9 648 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 OR52K1Q8NGK4 314 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 SH3RF2Q8TEC5 729 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 TRAPPC12Q8WVT3 735 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 PPP1R10Q96QC0 940 aaKnown RBP11.58□□□□□ -0.56
PDCD4-202ENST00000393104 MRPL45Q9BRJ2 306 aaKnown RBP11.58□□□□□ -0.56
PDCD4-202ENST00000393104 CACNA2D2Q9NY47 1150 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 CNOT6Q9ULM6 557 aaKnown RBP11.58□□□□□ -0.56
PDCD4-202ENST00000393104 SH3GLB1Q9Y371 365 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 MTF2Q9Y483 593 aaPredicted RBP11.58□□□□□ -0.56
PDCD4-202ENST00000393104 FAM72CH0Y354 149 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 RNF103O00237 685 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 SULT1C4O75897 302 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 PIGNO95427 931 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 GLUD2P49448 558 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 CCNA1P78396 465 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 NAB1Q13506 487 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 ZNF460Q14592 562 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 CYTH1Q15438 398 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 GRTP1Q5TC63 336 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 FAM72AQ5TYM5 149 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 FAM72DQ6L9T8 149 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 PPP4R4Q6NUP7 873 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 SCYL2Q6P3W7 929 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 FAM72BQ86X60 149 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 URGCPQ8TCY9 931 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 ABTB1Q969K4 478 aaPredicted RBP11.58□□□□□ -0.56
PDCD4-202ENST00000393104 FEM1CQ96JP0 617 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 NOL11Q9H8H0 719 aaKnown RBP11.58□□□□□ -0.56
PDCD4-202ENST00000393104 NMRAL1Q9HBL8 299 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 NGRNQ9NPE2 291 aaKnown RBP11.58□□□□□ -0.56
PDCD4-202ENST00000393104 RRN3Q9NYV6 651 aa11.58□□□□□ -0.56
PDCD4-202ENST00000393104 PSMC3P17980 439 aa11.57□□□□□ -0.56
PDCD4-202ENST00000393104 ATP6V1B2P21281 511 aa11.57□□□□□ -0.56
PDCD4-202ENST00000393104 NR2C2P49116 596 aa11.57□□□□□ -0.56
PDCD4-202ENST00000393104 UGT3A2Q3SY77 523 aa11.57□□□□□ -0.56
PDCD4-202ENST00000393104 OR6B2Q6IFH4 312 aa11.57□□□□□ -0.56
PDCD4-202ENST00000393104 C16orf89Q6UX73 402 aa11.57□□□□□ -0.56
PDCD4-202ENST00000393104 RPS27LQ71UM5 84 aaKnown RBP11.57□□□□□ -0.56
PDCD4-202ENST00000393104 PIGZQ86VD9 579 aa11.57□□□□□ -0.56
PDCD4-202ENST00000393104 RETREG3Q86VR2 466 aa11.57□□□□□ -0.56
PDCD4-202ENST00000393104 CDKL3Q8IVW4 592 aaPredicted RBP11.57□□□□□ -0.56
PDCD4-202ENST00000393104 MAP7D3Q8IWC1 876 aa11.57□□□□□ -0.56
PDCD4-202ENST00000393104 PCDH20Q8N6Y1 951 aaKnown RBP11.57□□□□□ -0.56
PDCD4-202ENST00000393104 ANKFN1Q8N957 763 aa11.57□□□□□ -0.56
PDCD4-202ENST00000393104 RNF149Q8NC42 400 aa11.57□□□□□ -0.56
PDCD4-202ENST00000393104 PPP1R14CQ8TAE6 165 aa11.57□□□□□ -0.56
PDCD4-202ENST00000393104 SPPL2BQ8TCT7 592 aa11.57□□□□□ -0.56
PDCD4-202ENST00000393104 BRI3BPQ8WY22 251 aa11.57□□□□□ -0.56
PDCD4-202ENST00000393104 NDRG1Q92597 394 aaKnown RBP11.57□□□□□ -0.56
PDCD4-202ENST00000393104 DLG3Q92796 817 aa11.57□□□□□ -0.56
PDCD4-202ENST00000393104 AGAP3Q96P47 875 aa11.57□□□□□ -0.56
PDCD4-202ENST00000393104 YIPF2Q9BWQ6 316 aa11.57□□□□□ -0.56
PDCD4-202ENST00000393104 FTHL17Q9BXU8 183 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms