RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 ITM2AO43736 263 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 USP12O75317 370 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 POMCP01189 267 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 PRKAA1Q13131 559 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 NFE2Q16621 373 aaPredicted RBP12.41□□□□□ -0.42
UBR4-203ENST00000375225 ACSBG2Q5FVE4 666 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 C1orf146Q5VVC0 180 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 RFWD3Q6PCD5 774 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 LRRC74BQ6ZQY2 392 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 KIAA0408Q6ZU52 694 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 RTN4RL1Q86UN2 441 aaPredicted RBP12.41□□□□□ -0.42
UBR4-203ENST00000375225 CNTN4Q8IWV2 1026 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 ABI1Q8IZP0 508 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 C3orf58Q8NDZ4 430 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 DBF4BQ8NFT6 615 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 DIS3LQ8TF46 1054 aaKnown RBP12.41□□□□□ -0.42
UBR4-203ENST00000375225 PDCD6IPQ8WUM4 868 aaKnown RBP12.41□□□□□ -0.42
UBR4-203ENST00000375225 LINC01599Q8WXQ3 324 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 CCDC126Q96EE4 140 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 MFSD3Q96ES6 412 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 FUBP3Q96I24 572 aaKnown RBP eCLIP12.41□□□□□ -0.42
UBR4-203ENST00000375225 C1orf74Q96LT6 269 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 SORT1Q99523 831 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 GORASP1Q9BQQ3 440 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 SIK2Q9H0K1 926 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 TASP1Q9H6P5 420 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 SLC17A6Q9P2U8 582 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 SLC39A10Q9ULF5 831 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 PCDHB7Q9Y5E2 793 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 NUMBLQ9Y6R0 609 aa12.41□□□□□ -0.42
UBR4-203ENST00000375225 KIF1CO43896 1103 aaKnown RBP12.4□□□□□ -0.42
UBR4-203ENST00000375225 SIN3BO75182 1162 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 PAGE1O75459 146 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 LYPLA1O75608 230 aaPredicted RBP12.4□□□□□ -0.42
UBR4-203ENST00000375225 CXCL10P02778 98 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 CLTBP09497 229 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 STMN1P16949 149 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 GM2AP17900 193 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 NCF2P19878 526 aaPredicted RBP12.4□□□□□ -0.42
UBR4-203ENST00000375225 RFC2P35250 354 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 CPA2P48052 419 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 RENBPP51606 427 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 NDST2P52849 883 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 SLC5A3P53794 718 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 CACNA2D1P54289 1103 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 NOMO2Q5JPE7 1267 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 PPM1JQ5JR12 505 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 RABGAP1LQ5R372 815 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 SNX30Q5VWJ9 437 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 SEL1L3Q68CR1 1132 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 CMC1Q7Z7K0 106 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 ZC3HC1Q86WB0 502 aaKnown RBP12.4□□□□□ -0.42
UBR4-203ENST00000375225 TREML1Q86YW5 311 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 RTL3Q8N8U3 475 aaKnown RBP12.4□□□□□ -0.42
UBR4-203ENST00000375225 TDRD5Q8NAT2 981 aaKnown RBP12.4□□□□□ -0.42
UBR4-203ENST00000375225 OR6Y1Q8NGX8 325 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 TSPAN17Q96FV3 270 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 PRR11Q96HE9 360 aaPredicted RBP12.4□□□□□ -0.42
UBR4-203ENST00000375225 CELF6Q96J87 481 aaKnown RBP12.4□□□□□ -0.42
UBR4-203ENST00000375225 FAM193BQ96PV7 902 aaPredicted RBP12.4□□□□□ -0.42
UBR4-203ENST00000375225 SERPINI1Q99574 410 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 PKMYT1Q99640 499 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 RTP3Q9BQQ7 232 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 ACE2Q9BYF1 805 aaPredicted RBP12.4□□□□□ -0.42
UBR4-203ENST00000375225 ANLNQ9NQW6 1124 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 CHRAC1Q9NRG0 131 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 OLA1Q9NTK5 396 aaKnown RBP12.4□□□□□ -0.42
UBR4-203ENST00000375225 TMEM39AQ9NV64 488 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 OXSMQ9NWU1 459 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 ARHGAP26Q9UNA1 814 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 PLA2G4CQ9UP65 541 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 LRCH1Q9Y2L9 728 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 ACOT9Q9Y305 439 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 TCAF1Q9Y4C2 921 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 SHROOM3Q8TF72 1996 aa12.4□□□□□ -0.42
UBR4-203ENST00000375225 HEATR9A2RTY3 570 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 TMEM189-UBE2V1I3L0A0 370 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 THRAP10827 490 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 NMBRP28336 390 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 BRCC3P46736 316 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 CD151P48509 253 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 AFF1P51825 1210 aaKnown RBP12.39□□□□□ -0.43
UBR4-203ENST00000375225 CCL23P55773 120 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 RAB10P61026 200 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 ACTR3P61158 418 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 POU4F1Q01851 419 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 KLC1Q07866 573 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 TUBB3Q13509 450 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 EIF4EBP2Q13542 120 aaPredicted RBP12.39□□□□□ -0.43
UBR4-203ENST00000375225 UBAP2LQ14157 1087 aaKnown RBP12.39□□□□□ -0.43
UBR4-203ENST00000375225 FAM182AQ5T1J6 154 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 TMCO4Q5TGY1 634 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 MANEALQ5VSG8 457 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 CES4AQ5XG92 561 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 KIAA0930Q6ICG6 404 aaPredicted RBP12.39□□□□□ -0.43
UBR4-203ENST00000375225 IRGCQ6NXR0 463 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 KLC3Q6P597 504 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 EPGNQ6UW88 154 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 C16orf89Q6UX73 402 aa12.39□□□□□ -0.43
UBR4-203ENST00000375225 NECAB2Q7Z6G3 386 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms