RNA–Protein interactions for RNA: ENST00000374990.6

TGFBR1-201, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-201ENST00000374990 YME1L1Q96TA2 773 aa19.76■□□□□ 0.75
TGFBR1-201ENST00000374990 APOBEC3GQ9HC16 384 aaKnown RBP19.76■□□□□ 0.75
TGFBR1-201ENST00000374990 C5orf60A6NFR6 353 aa19.76■□□□□ 0.75
TGFBR1-201ENST00000374990 DGKAP23743 735 aa19.76■□□□□ 0.75
TGFBR1-201ENST00000374990 ATP6V0D1P61421 351 aa19.76■□□□□ 0.75
TGFBR1-201ENST00000374990 PGS1Q32NB8 556 aa19.76■□□□□ 0.75
TGFBR1-201ENST00000374990 PPP1R15BQ5SWA1 713 aa19.76■□□□□ 0.75
TGFBR1-201ENST00000374990 OTUD3Q5T2D3 398 aaPredicted RBP19.76■□□□□ 0.75
TGFBR1-201ENST00000374990 ECHDC2Q86YB7 292 aa19.76■□□□□ 0.75
TGFBR1-201ENST00000374990 SLC41A1Q8IVJ1 513 aa19.76■□□□□ 0.75
TGFBR1-201ENST00000374990 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.76■□□□□ 0.75
TGFBR1-201ENST00000374990 PCDH20Q8N6Y1 951 aaKnown RBP19.76■□□□□ 0.75
TGFBR1-201ENST00000374990 STARD8Q92502 1023 aa19.76■□□□□ 0.75
TGFBR1-201ENST00000374990 TADA1Q96BN2 335 aa19.76■□□□□ 0.75
TGFBR1-201ENST00000374990 RNF145Q96MT1 663 aa19.76■□□□□ 0.75
TGFBR1-201ENST00000374990 AHSPQ9NZD4 102 aa19.76■□□□□ 0.75
TGFBR1-201ENST00000374990 SEC22BO75396 215 aa19.76■□□□□ 0.75
TGFBR1-201ENST00000374990 TCEA3O75764 348 aa19.76■□□□□ 0.75
TGFBR1-201ENST00000374990 GUCA1CO95843 209 aa19.76■□□□□ 0.75
TGFBR1-201ENST00000374990 PLD1Q13393 1074 aa19.76■□□□□ 0.75
TGFBR1-201ENST00000374990 TJAP1Q5JTD0 557 aa19.76■□□□□ 0.75
TGFBR1-201ENST00000374990 STK32CQ86UX6 486 aa19.76■□□□□ 0.75
TGFBR1-201ENST00000374990 CIPCQ9C0C6 399 aa19.76■□□□□ 0.75
TGFBR1-201ENST00000374990 MSCO60682 206 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 MRPS15P82914 257 aaKnown RBP19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 TUSC3Q13454 348 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 ZDHHC13Q8IUH4 622 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 ULK2Q8IYT8 1036 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 SETD9Q8NE22 299 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 ACTRT2Q8TDY3 377 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 PTCD3Q96EY7 689 aaKnown RBP19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 ZMAT2Q96NC0 199 aaKnown RBP19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 SDCBP2Q9H190 292 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 PLA2G4CQ9UP65 541 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 FGF1P05230 155 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 NUMBP49757 651 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 WNT3AP56704 352 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 HECTD3Q5T447 861 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 DEPDC1Q5TB30 811 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 SF3B1O75533 1304 aaKnown RBP eCLIP19.75■□□□□ 0.754e-6■■■■■ 77.6
TGFBR1-201ENST00000374990 GPC1P35052 558 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 CCDC85BQ15834 202 aaPredicted RBP19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 TFAP2BQ92481 460 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 FCRL2Q96LA5 508 aaPredicted RBP19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 PDZD7Q9H5P4 517 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 GLOD4Q9HC38 313 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 ZDHHC18Q9NUE0 388 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 PCDHB12Q9Y5F1 795 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 TRIM38O00635 465 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 SERPINA4P29622 427 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 RAP1GAP2Q684P5 730 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 FITM2Q8N6M3 262 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 NR1H4Q96RI1 486 aaPredicted RBP19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 CAMKK2Q96RR4 588 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 PDGFDQ9GZP0 370 aaPredicted RBP19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 FZD8Q9H461 694 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 C6orf203Q9P0P8 240 aaPredicted RBP19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 CES1P23141 567 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 HTR7P34969 479 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 FAM13CQ8NE31 585 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 BHLHE22Q8NFJ8 381 aaPredicted RBP19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 FTHL17Q9BXU8 183 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 OSBPL7Q9BZF2 842 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 SPAG4Q9NPE6 437 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 TMEM59LQ9UK28 342 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 CLCA2Q9UQC9 943 aa19.75■□□□□ 0.75
TGFBR1-201ENST00000374990 XRN1Q8IZH2 1706 aaKnown RBP19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 CPSF4O95639 269 aaKnown RBP19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 FAM110CQ1W6H9 321 aa19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 TNS4Q8IZW8 715 aa19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 QKIQ96PU8 341 aaKnown RBP eCLIP19.74■□□□□ 0.758e-9■■■■■ 27.3
TGFBR1-201ENST00000374990 ZCWPW1Q9H0M4 648 aa19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 ANAPC2Q9UJX6 822 aa19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 C2CD4BA6NLJ0 364 aa19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 RECQL5O94762 991 aaPredicted RBP19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 ANPEPP15144 967 aa19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 S100A3P33764 101 aa19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 XIAPP98170 497 aa19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 CDK18Q07002 472 aa19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 FIG4Q92562 907 aa19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 STK39Q9UEW8 545 aa19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 LIMD1Q9UGP4 676 aa19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 ENOPH1Q9UHY7 261 aa19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 MTF2Q9Y483 593 aaPredicted RBP19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 IPPQ9Y573 584 aa19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 TULP2O00295 520 aa19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 TSPAN3O60637 253 aa19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 ZDHHC24Q6UX98 284 aa19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 C10orf107Q8IVU9 208 aa19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 CLYBLQ8N0X4 340 aa19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 SLC9A7Q96T83 725 aa19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 MLPHQ9BV36 600 aaPredicted RBP19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 ZNF112Q9UJU3 913 aa19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 DNMT3LQ9UJW3 386 aa19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 VWA7Q9Y334 891 aa19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 GSC2O15499 205 aa19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 CNOT3O75175 753 aaKnown RBP19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 RXRGP48443 463 aa19.74■□□□□ 0.75
TGFBR1-201ENST00000374990 TRIM60Q495X7 471 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms