RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 GPR108Q9NPR9 543 aa15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 IFT46Q9NQC8 304 aa15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 TSPAN1O60635 241 aa15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 FAM228BP0C875 321 aa15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 FAM153CQ494X1 144 aa15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 OGFOD2Q6N063 350 aa15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 TTI2Q6NXR4 508 aa15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 EFCAB3Q8N7B9 438 aa15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 PPP1R13LQ8WUF5 828 aa15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 REPS1Q96D71 796 aa15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 SENP6Q9GZR1 1112 aaPredicted RBP15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 SASH3O75995 380 aa15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 GADD45AP24522 165 aa15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 MAPK12P53778 367 aa15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 OR2B6P58173 313 aa15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 PDPRQ8NCN5 879 aa15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 OR56A4Q8NGH8 313 aa15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 ZNF717Q9BY31 904 aaPredicted RBP15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 CCNB1IP1Q9NPC3 277 aa15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 CORO2BQ9UQ03 480 aa15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 EYA4O95677 639 aa15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 KYAT3Q6YP21 454 aaKnown RBP15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 CCDC28AQ8IWP9 274 aa15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 STARD8Q92502 1023 aa15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 ZNF69Q9UC07 566 aa15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 CAPN6Q9Y6Q1 641 aa15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 A0A075B6Q4 140 aa15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 S100A3P33764 101 aa15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 PABPC1LQ4VXU2 614 aaKnown RBP15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 SLC45A4Q5BKX6 768 aa15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 C12orf43Q96C57 262 aaKnown RBP15.47■□□□□ 0.07
GTF3C4-201ENST00000372146 MAGI3Q5TCQ9 1506 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 ERN1O75460 977 aaKnown RBP15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 IL18RAPO95256 599 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 ITGA2P17301 1181 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 PSMA1P25786 263 aaKnown RBP15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 SEMA3AQ14563 771 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 SLC34A3Q8N130 599 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 SRFBP1Q8NEF9 429 aaKnown RBP15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 CNOT7Q9UIV1 285 aaKnown RBP15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 USP17L10C9JJH3 530 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 DNTTP04053 509 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 EPORP19235 508 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 CLEC17AQ6ZS10 378 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 ZDHHC9Q9Y397 364 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 ARL5CA6NH57 179 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 PGRP06401 933 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 SQLEQ14534 574 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 AMHR2Q16671 573 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 TMEM179Q6ZVK1 233 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 C12orf66Q96MD2 445 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 PIH1D3Q9NQM4 214 aaKnown RBP15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 DNAAF2Q9NVR5 837 aaKnown RBP15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 PRR12Q9ULL5 1215 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 TPP1O14773 563 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 SCAMP1O15126 338 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 DDX3YO15523 660 aaKnown RBP15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 SSX5O60225 188 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 OR10H3O60404 316 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 ACADVLP49748 655 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 ERVK-24P63145 666 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 CLIP4Q8N3C7 705 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 TMIEQ8NEW7 156 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 PNPT1Q8TCS8 783 aaKnown RBP15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 CDCA7Q9BWT1 371 aaPredicted RBP15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 MAGEE1Q9HCI5 957 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 ST3GAL5Q9UNP4 418 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 PADI2Q9Y2J8 665 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 ARHGEF5Q12774 1597 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 CEP170Q5SW79 1584 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 FESP07332 822 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 PDK2Q15119 407 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 PPM1LQ5SGD2 360 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 RNF43Q68DV7 783 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 NAGPAQ9UK23 515 aa15.46■□□□□ 0.07
GTF3C4-201ENST00000372146 SLC33A1O00400 549 aaPredicted RBP15.46■□□□□ 0.06
GTF3C4-201ENST00000372146 RSL1D1O76021 490 aaKnown RBP15.46■□□□□ 0.06
GTF3C4-201ENST00000372146 CYP2A7P20853 494 aa15.46■□□□□ 0.06
GTF3C4-201ENST00000372146 AP3M1Q9Y2T2 418 aa15.46■□□□□ 0.06
GTF3C4-201ENST00000372146 UMODL1Q5DID0 1318 aa15.46■□□□□ 0.06
GTF3C4-201ENST00000372146 PRKD3O94806 890 aa15.46■□□□□ 0.06
GTF3C4-201ENST00000372146 GH2P01242 217 aa15.46■□□□□ 0.06
GTF3C4-201ENST00000372146 GANQ9H2C0 597 aa15.46■□□□□ 0.06
GTF3C4-201ENST00000372146 OSGEPL1Q9H4B0 414 aa15.46■□□□□ 0.06
GTF3C4-201ENST00000372146 CATSPERZQ9NTU4 200 aa15.46■□□□□ 0.06
GTF3C4-201ENST00000372146 COX4I1P13073 169 aa15.45■□□□□ 0.06
GTF3C4-201ENST00000372146 MCAMP43121 646 aa15.45■□□□□ 0.06
GTF3C4-201ENST00000372146 PTENP60484 403 aa15.45■□□□□ 0.06
GTF3C4-201ENST00000372146 KLHDC7AQ5VTJ3 777 aa15.45■□□□□ 0.06
GTF3C4-201ENST00000372146 DBNDD1Q9H9R9 158 aa15.45■□□□□ 0.06
GTF3C4-201ENST00000372146 PCDH10Q9P2E7 1040 aa15.45■□□□□ 0.06
GTF3C4-201ENST00000372146 MKLN1Q9UL63 735 aa15.45■□□□□ 0.06
GTF3C4-201ENST00000372146 ENTPD4Q9Y227 616 aa15.45■□□□□ 0.06
GTF3C4-201ENST00000372146 TNNI3P19429 210 aa15.45■□□□□ 0.06
GTF3C4-201ENST00000372146 BNIP1Q12981 228 aa15.45■□□□□ 0.06
GTF3C4-201ENST00000372146 COMTD1Q86VU5 262 aa15.45■□□□□ 0.06
GTF3C4-201ENST00000372146 ZBTB8BQ8NAP8 495 aaPredicted RBP15.45■□□□□ 0.06
GTF3C4-201ENST00000372146 PHC3Q8NDX5 983 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms