RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 MGME1Q9BQP7 344 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 OR51E2Q9H255 320 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 SMDT1Q9H4I9 107 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 PSTPIP2Q9H939 334 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ATP6AP2A0A1C7CYW4 349 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 TMEM120BA0PK00 339 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 SGK1O00141 431 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ATP6AP2O75787 350 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 RRM2P31350 389 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 PLA2G4AP47712 749 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 TBL3Q12788 808 aaKnown RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 TCP10Q12799 353 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 MRPL52Q86TS9 123 aaKnown RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 OXER1Q8TDS5 423 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 CSGALNACT1Q8TDX6 532 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 RNF157Q96PX1 679 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 OR52B2Q96RD2 323 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 PDE2AO00408 941 aaPredicted RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 SOAT2O75908 522 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 EIF2AK1Q9BQI3 630 aaKnown RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 MRPL44Q9H9J2 332 aaKnown RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 DPP7Q9UHL4 492 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 HDAC3O15379 428 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 PHGDHO43175 533 aaKnown RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 YES1P07947 543 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 CBLBQ13191 982 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 TIGD4Q8IY51 512 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 LRRN4Q8WUT4 740 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 PSKH2Q96QS6 385 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 HLCSP50747 726 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 UBXN2BQ14CS0 331 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 CHI3L2Q15782 390 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 LPCAT3Q6P1A2 487 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 LRRC74BQ6ZQY2 392 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 KRT77Q7Z794 578 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF321PQ8N8H1 164 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 MFSD9Q8NBP5 474 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 SLC39A7Q92504 469 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 KCNH7Q9NS40 1196 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 CDH7Q9ULB5 785 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 MAGEB6P1A0A0J9YX57 407 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 UBE2Q2LH0YL09 131 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF432O94892 652 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 LDHBP07195 334 aaKnown RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 GPR143P51810 404 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ZNF211Q13398 564 aaPredicted RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 CPT1BQ92523 772 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 TAS2R13Q9NYV9 303 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 PRKCZQ05513 592 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 CCNYL1Q8N7R7 359 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 FUCA2Q9BTY2 467 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 PITHD1Q9GZP4 211 aaPredicted RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 KCNF1Q9H3M0 494 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 FAM220BPB1ANY3 271 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 C6orf229H3BNL8 230 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 CLPXO76031 633 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 PTPN5P54829 565 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 RAG2P55895 527 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 QPRTQ15274 297 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 DLGAP5Q15398 846 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 FAM35AQ86V20 835 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ATP6V1E2Q96A05 226 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 NECTIN4Q96NY8 510 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 WDR55Q9H6Y2 383 aaPredicted RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 FAM120CQ9NX05 1096 aaKnown RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 PLEKHA6Q9Y2H5 1048 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 BCAS1O75363 584 aaPredicted RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 SLC16A2P36021 539 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 RFC5P40937 340 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 HSD17B4P51659 736 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 CYCSP99999 105 aaKnown RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 CNSTQ6PJW8 725 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 SSX9Q7RTT3 188 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 TMEM17Q86X19 198 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 BLIDQ8IZY5 108 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 OR7A2PQ8NGA2 310 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 SUCLG2Q96I99 432 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 RNPC3Q96LT9 517 aaKnown RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 GFM1Q96RP9 751 aaKnown RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 SDR42E2A6NKP2 422 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 SDC2P34741 201 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ZFP69Q49AA0 526 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 KANSL1Q7Z3B3 1105 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 H2AFY2Q9P0M6 372 aaPredicted RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 SNX24Q9Y343 169 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ABCA6Q8N139 1617 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 CYP26A1O43174 497 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 SEC23BQ15437 767 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 OTUD1Q5VV17 481 aaPredicted RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 TTBK2Q6IQ55 1244 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 C6orf120Q7Z4R8 191 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 ENGASEQ8NFI3 743 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 PIWIL2Q8TC59 973 aaKnown RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 CXorf40BQ96DE9 158 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 TRMT112Q9UI30 125 aaKnown RBP3.8□□□□□ -1.8
SYNE1-207ENST00000367255 RGSL1A5PLK6 1076 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 TPBGLP0DKB5 382 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 CACNA2D1P54289 1103 aa3.8□□□□□ -1.8
SYNE1-207ENST00000367255 DDB1Q16531 1140 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms