RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 CDCA5Q96FF9 252 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 NAT9Q9BTE0 207 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 FTHL17Q9BXU8 183 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 ASB7Q9H672 318 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 TRPC7Q9HCX4 862 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 TNFRSF12AQ9NP84 129 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 PRMT7Q9NVM4 692 aaPredicted RBP13.78□□□□□ -0.2
PRKN-205ENST00000366897 GJD2Q9UKL4 321 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 FZD10Q9ULW2 581 aa13.78□□□□□ -0.2
PRKN-205ENST00000366897 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.78□□□□□ -0.2
PRKN-205ENST00000366897 C9JVG2 144 aa13.77□□□□□ -0.2
PRKN-205ENST00000366897 BOLA2-SMG1P6H3BVE0 249 aa13.77□□□□□ -0.2
PRKN-205ENST00000366897 TSPAN8P19075 237 aa13.77□□□□□ -0.2
PRKN-205ENST00000366897 PTPN3P26045 913 aa13.77□□□□□ -0.2
PRKN-205ENST00000366897 MPP1Q00013 466 aa13.77□□□□□ -0.2
PRKN-205ENST00000366897 ADIGQ0VDE8 80 aa13.77□□□□□ -0.2
PRKN-205ENST00000366897 ZYG11AQ6WRX3 759 aa13.77□□□□□ -0.2
PRKN-205ENST00000366897 HFE2Q6ZVN8 426 aa13.77□□□□□ -0.2
PRKN-205ENST00000366897 NT5DC4Q86YG4 428 aa13.77□□□□□ -0.2
PRKN-205ENST00000366897 RNF135Q8IUD6 432 aa13.77□□□□□ -0.2
PRKN-205ENST00000366897 KLHL23Q8NBE8 558 aa13.77□□□□□ -0.2
PRKN-205ENST00000366897 RNF169Q8NCN4 708 aa13.77□□□□□ -0.2
PRKN-205ENST00000366897 MLPHQ9BV36 600 aaPredicted RBP13.77□□□□□ -0.2
PRKN-205ENST00000366897 ZNF385DQ9H6B1 395 aa13.77□□□□□ -0.2
PRKN-205ENST00000366897 PRDM16Q9HAZ2 1276 aa13.77□□□□□ -0.2
PRKN-205ENST00000366897 EBF1Q9UH73 591 aa13.77□□□□□ -0.2
PRKN-205ENST00000366897 ZNF711Q9Y462 761 aa13.77□□□□□ -0.2
PRKN-205ENST00000366897 FAM149AA5PLN7 773 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 PRORSD1PA6NEY8 169 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 SAC3D1A6NKF1 404 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 ZNF839A8K0R7 811 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 C9IYK1 514 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 M0QYT0 321 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 CLIC3O95833 236 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 MCF2P10911 925 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 GABRB3P28472 473 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 NAB1Q13506 487 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 TMEM135Q86UB9 458 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 HERC6Q8IVU3 1022 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 CEP97Q8IW35 865 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 CENPLQ8N0S6 344 aaPredicted RBP13.77□□□□□ -0.21
PRKN-205ENST00000366897 FAM47BQ8NA70 645 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 SLCO4A1Q96BD0 722 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 FAM210AQ96ND0 272 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 IL1RL2Q9HB29 575 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 OLAHQ9NV23 265 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 SNTG2Q9NY99 539 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 FAF1Q9UNN5 650 aaPredicted RBP13.77□□□□□ -0.21
PRKN-205ENST00000366897 PCDHGA7Q9Y5G6 932 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 ATP6AP2A0A1C7CYW4 349 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 ATP6AP2O75787 350 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 C22orf31O95567 290 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 MPOP05164 745 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 SLC35E2BP0CK96 405 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 NFKB1P19838 968 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 TKTP29401 623 aaKnown RBP13.77□□□□□ -0.21
PRKN-205ENST00000366897 CD68P34810 354 aaPredicted RBP13.77□□□□□ -0.21
PRKN-205ENST00000366897 NME5P56597 212 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 GJA9P57773 515 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 CTBSQ01459 385 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 ZBTB17Q13105 803 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 PRKAA1Q13131 559 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 C16orf72Q14CZ0 275 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 CELF3Q5SZQ8 465 aaKnown RBP13.77□□□□□ -0.21
PRKN-205ENST00000366897 OTUD1Q5VV17 481 aaPredicted RBP13.77□□□□□ -0.21
PRKN-205ENST00000366897 PSTKQ8IV42 348 aaKnown RBP13.77□□□□□ -0.21
PRKN-205ENST00000366897 NPWQ8N729 165 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 HMGCLL1Q8TB92 370 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 DDI1Q8WTU0 396 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 C1QTNF1Q9BXJ1 281 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 EIF2B3Q9NR50 452 aaKnown RBP13.77□□□□□ -0.21
PRKN-205ENST00000366897 PLK2Q9NYY3 685 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 ADAM28Q9UKQ2 775 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 KIAA1257Q9ULG3 409 aa13.77□□□□□ -0.21
PRKN-205ENST00000366897 HACD1B0YJ81 288 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 I6L893 689 aaPredicted RBP13.76□□□□□ -0.21
PRKN-205ENST00000366897 EEF2KO00418 725 aaKnown RBP13.76□□□□□ -0.21
PRKN-205ENST00000366897 TRIM38O00635 465 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 NRP1O14786 923 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 H6PDO95479 791 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 ERCC2P18074 760 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 TPP2P29144 1249 aaPredicted RBP13.76□□□□□ -0.21
PRKN-205ENST00000366897 AGKQ53H12 422 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 HMBOX1Q6NT76 420 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 CNSTQ6PJW8 725 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 KDM1BQ8NB78 822 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 ISL2Q96A47 359 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 CELF6Q96J87 481 aaKnown RBP13.76□□□□□ -0.21
PRKN-205ENST00000366897 TRIM8Q9BZR9 551 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 SDHDO14521 159 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 BEST1O76090 585 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 AP2A1O95782 977 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 PGK1P00558 417 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 EDNRBP24530 442 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 MAPK10P53779 464 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 POU5F1BQ06416 359 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 TSTD2Q5T7W7 516 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 DCAF15Q66K64 600 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 LRRC8EQ6NSJ5 796 aa13.76□□□□□ -0.21
PRKN-205ENST00000366897 POTEHQ6S545 545 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms