RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 MTERF3Q96E29 417 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 APOL4Q9BPW4 351 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 A0A087X1B8 175 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 MLNP12872 115 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 NR4A1P22736 598 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 DNAJB2P25686 324 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 TAF6P49848 677 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 SV2CQ496J9 727 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 PHTF2Q8N3S3 785 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 BORCS6Q96GS4 357 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 PKP2Q99959 881 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 MRPL57Q9BQC6 102 aaKnown RBP16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 TRIM54Q9BYV2 358 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 TLE6Q9H808 572 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 RBM22Q9NW64 420 aaKnown RBP eCLIP16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 POLG2Q9UHN1 485 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 ADAMTS6Q9UKP5 1117 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 RAD54BQ9Y620 910 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 LACTBL1A8MY62 500 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 PAPSS1O43252 624 aaPredicted RBP16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 ATG7O95352 703 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 GOT1P17174 413 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 PPM1FP49593 454 aaPredicted RBP16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 GTF2A2P52657 109 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 RAB10P61026 200 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 TMEM62Q0P6H9 643 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 SLC9B1Q4ZJI4 515 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 ZC3H12BQ5HYM0 836 aaKnown RBP16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 CACHD1Q5VU97 1274 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 AKAP14Q86UN6 197 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 SNX31Q8N9S9 440 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 SYTL2Q9HCH5 934 aa16.16■□□□□ 0.18
CLSTN1-201ENST00000361311 A0A087WZ62 844 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 BCLAF3A2AJT9 711 aaKnown RBP16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 GJC2Q5T442 439 aaPredicted RBP16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 BSNDQ8WZ55 320 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 PRKD2Q9BZL6 878 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 GPR88Q9GZN0 384 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 ALG9Q9H6U8 611 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 TBCCD1Q9NVR7 557 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 SMPD3Q9NY59 655 aaPredicted RBP16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 TRMT6Q9UJA5 497 aaKnown RBP16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 C3orf18Q9UK00 162 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 SLC15A5A6NIM6 579 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 LZTS3O60299 673 aaPredicted RBP16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 CST3P01034 146 aaPredicted RBP16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 BNIP3Q12983 259 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 CARTPTQ16568 116 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 ZBED5Q49AG3 693 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 IL23RQ5VWK5 629 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 KCTD8Q6ZWB6 473 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 FBXO39Q8N4B4 442 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 EFHBQ8N7U6 833 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 C17orf50Q8WW18 174 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 ZHX1-C8orf76Q96EF9 292 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 PCDHAC1Q9H158 963 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 LHX5Q9H2C1 402 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 LTN1O94822 1766 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 ACKR2O00590 384 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 NCCRP1Q6ZVX7 275 aaPredicted RBP16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 TBC1D21Q8IYX1 336 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 AMER2Q8N7J2 671 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 SLC4A11Q8NBS3 891 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 HTRA1Q92743 480 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 TMEM134Q9H6X4 195 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 ERAP1Q9NZ08 941 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 FAM198AQ9UFP1 575 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 UBQLN1Q9UMX0 589 aaKnown RBP16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 ZNF536O15090 1300 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 MYOCOSA0A1B0GUC4 107 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 TMEM247A6NEH6 219 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 TADA2AO75478 443 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 AMHP03971 560 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 LTA4HP09960 611 aaKnown RBP16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 ADIGQ0VDE8 80 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 KLF1Q13351 362 aaPredicted RBP16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 DDR2Q16832 855 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 PARP8Q8N3A8 854 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 P2RY11Q96G91 374 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 CPB2Q96IY4 423 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 ASB7Q9H672 318 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 APOBEC3GQ9HC16 384 aaKnown RBP16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 RGS18Q9NS28 235 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 TMEM161AQ9NX61 479 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 DKK3Q9UBP4 350 aa16.15■□□□□ 0.18
CLSTN1-201ENST00000361311 GSSP48637 474 aa16.14■□□□□ 0.17
CLSTN1-201ENST00000361311 CTBP1Q13363 440 aa16.14■□□□□ 0.17
CLSTN1-201ENST00000361311 XYLT1Q86Y38 959 aa16.14■□□□□ 0.17
CLSTN1-201ENST00000361311 STX19Q8N4C7 294 aa16.14■□□□□ 0.17
CLSTN1-201ENST00000361311 CERS5Q8N5B7 392 aa16.14■□□□□ 0.17
CLSTN1-201ENST00000361311 PDPRQ8NCN5 879 aa16.14■□□□□ 0.17
CLSTN1-201ENST00000361311 ASB2Q96Q27 587 aa16.14■□□□□ 0.17
CLSTN1-201ENST00000361311 VAT1Q99536 393 aa16.14■□□□□ 0.17
CLSTN1-201ENST00000361311 FANCEQ9HB96 536 aa16.14■□□□□ 0.17
CLSTN1-201ENST00000361311 VTA1Q9NP79 307 aa16.14■□□□□ 0.17
CLSTN1-201ENST00000361311 PNPLA8Q9NP80 782 aa16.14■□□□□ 0.17
CLSTN1-201ENST00000361311 LOC100506127A0A0U1RQW1 187 aa16.14■□□□□ 0.17
CLSTN1-201ENST00000361311 BNIP3LO60238 219 aa16.14■□□□□ 0.17
CLSTN1-201ENST00000361311 ATP6V1E1P36543 226 aa16.14■□□□□ 0.17
CLSTN1-201ENST00000361311 MYLK3Q32MK0 819 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms