RNA–Protein interactions for RNA: ENST00000355637.8

RBFOX1-203, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-203ENST00000355637 TFCP2L1Q9NZI6 479 aa9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 DTLQ9NZJ0 730 aa9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 SLC22A7Q9Y694 548 aa9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 SRCP12931 536 aa9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 PBLDP30039 288 aaPredicted RBP9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 CCND2P30279 289 aa9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 IL12RB1P42701 662 aa9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 AIF1P55008 147 aa9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 LSM3P62310 102 aaKnown RBP9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 S100A12P80511 92 aa9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 GCNT1Q02742 428 aa9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 NFX1Q12986 1120 aaKnown RBP9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 DSG2Q14126 1118 aa9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 DHX34Q14147 1143 aaKnown RBP9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 SEC23AQ15436 765 aa9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 PPP4R3CPQ6ZMV5 832 aa9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 SLCO6A1Q86UG4 719 aa9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 HORMAD1Q86X24 394 aa9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 CTAGE3PQ8IX95 158 aa9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 NAT16Q8N8M0 369 aa9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 ZNF527Q8NB42 609 aa9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 AGBL3Q8NEM8 1001 aa9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 PCNPQ8WW12 178 aaKnown RBP9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 BIRC7Q96CA5 298 aa9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 FOPNLQ96NB1 174 aa9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 REXO4Q9GZR2 422 aaKnown RBP9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 CNOT11Q9UKZ1 510 aaKnown RBP9.05□□□□□ -0.96
RBFOX1-203ENST00000355637 A0A1W2PPM1 405 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 A0A1W2PQJ5 194 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 ERBB2P04626 1255 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 SERPING1P05155 500 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 CYP2D6P10635 497 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 TCN1P20061 433 aaPredicted RBP9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 GABRB3P28472 473 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 YAP1P46937 504 aaKnown RBP9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 POU3F4P49335 361 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 CAPZA1P52907 286 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 EVX2Q03828 476 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 KYAT1Q16773 422 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 GTF2IRD2BQ6EKJ0 949 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 KIAA1324Q6UXG2 1013 aaKnown RBP9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 SNX20Q7Z614 316 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 GTF2IRD2Q86UP8 949 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 FAM124AQ86V42 546 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 PALM2Q8IXS6 379 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 FIBCD1Q8N539 461 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 GLB1L3Q8NCI6 653 aaPredicted RBP9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 SLC2A14Q8TDB8 520 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 GPKOWQ92917 476 aaPredicted RBP eCLIP9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 EFHD1Q9BUP0 239 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 DHX33Q9H6R0 707 aaKnown RBP9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 C8orf33Q9H7E9 229 aaPredicted RBP9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 KANSL2Q9H9L4 492 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 OLAHQ9NV23 265 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 NXF1Q9UBU9 619 aaKnown RBP9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 POLG2Q9UHN1 485 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 CDH22Q9UJ99 828 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 TINAGQ9UJW2 476 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 DNAJC12Q9UKB3 198 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 PARP4Q9UKK3 1724 aaKnown RBP9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 SSU72P8A0A1W2PR75 194 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 CLRN2A0PK11 232 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 SAGE2PA6NJ88 616 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 LEUTXA8MZ59 168 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 PODXLO00592 558 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 GTPBP6O43824 516 aaPredicted RBP9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 LRRN2O75325 713 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 ATP5BP06576 529 aaKnown RBP9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 PLS3P13797 630 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 OSBPP22059 807 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 EPHA3P29320 983 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 HADHBP55084 474 aaKnown RBP9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 CASC4Q6P4E1 433 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 KYAT3Q6YP21 454 aaKnown RBP9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 KCTD8Q6ZWB6 473 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 ZSWIM9Q86XI8 627 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 CLYBLQ8N0X4 340 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 OR2T34Q8NGX1 318 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 TTC9Q92623 222 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 PPWD1Q96BP3 646 aaKnown RBP9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 SHISA4Q96DD7 197 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 HSFY1Q96LI6 401 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 ERGIC2Q96RQ1 377 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 CINPQ9BW66 212 aaPredicted RBP9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 EDEM3Q9BZQ6 932 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 INTS2Q9H0H0 1204 aaKnown RBP9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 KCTD10Q9H3F6 313 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 MTRRQ9UBK8 725 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 ATXN7L1Q9ULK2 861 aaPredicted RBP9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 COPS3Q9UNS2 423 aa9.04□□□□□ -0.96
RBFOX1-203ENST00000355637 CCDC182A6NF36 153 aa9.03□□□□□ -0.96
RBFOX1-203ENST00000355637 TLR3O15455 904 aaKnown RBP9.03□□□□□ -0.96
RBFOX1-203ENST00000355637 ECDO95905 644 aaPredicted RBP9.03□□□□□ -0.96
RBFOX1-203ENST00000355637 APOC1P02654 83 aa9.03□□□□□ -0.96
RBFOX1-203ENST00000355637 PTPN1P18031 435 aaKnown RBP9.03□□□□□ -0.96
RBFOX1-203ENST00000355637 MSH3P20585 1137 aa9.03□□□□□ -0.96
RBFOX1-203ENST00000355637 CSKP41240 450 aa9.03□□□□□ -0.96
RBFOX1-203ENST00000355637 ALDH7A1P49419 539 aaKnown RBP9.03□□□□□ -0.96
RBFOX1-203ENST00000355637 MFAP3P55082 362 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms