RNA–Protein interactions for RNA: ENST00000355371.8

SHTN1-202, Transcript of shootin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SHTN1, Length 5,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-202ENST00000355371 TRAPPC9Q96Q05 1148 aa16.55■□□□□ 0.24
SHTN1-202ENST00000355371 TMEM216Q9P0N5 145 aa16.55■□□□□ 0.24
SHTN1-202ENST00000355371 ATG7O95352 703 aa16.55■□□□□ 0.24
SHTN1-202ENST00000355371 DUSP28Q4G0W2 176 aa16.55■□□□□ 0.24
SHTN1-202ENST00000355371 NIFKQ9BYG3 293 aaKnown RBP16.55■□□□□ 0.24
SHTN1-202ENST00000355371 FBXO6Q9NRD1 293 aaPredicted RBP16.55■□□□□ 0.24
SHTN1-202ENST00000355371 RCOR3Q9P2K3 495 aaPredicted RBP16.55■□□□□ 0.24
SHTN1-202ENST00000355371 KPNA3O00505 521 aaPredicted RBP16.55■□□□□ 0.24
SHTN1-202ENST00000355371 CCNE2O96020 404 aa16.55■□□□□ 0.24
SHTN1-202ENST00000355371 ITGA2BP08514 1039 aa16.55■□□□□ 0.24
SHTN1-202ENST00000355371 LCLAT1Q6UWP7 414 aa16.55■□□□□ 0.24
SHTN1-202ENST00000355371 TRIM17Q9Y577 477 aa16.55■□□□□ 0.24
SHTN1-202ENST00000355371 FAM237BA0A1B0GVD1 139 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 KCNH1O95259 989 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 ABCB1P08183 1280 aaPredicted RBP16.54■□□□□ 0.24
SHTN1-202ENST00000355371 PTGR2Q8N8N7 351 aaPredicted RBP16.54■□□□□ 0.24
SHTN1-202ENST00000355371 ALG3Q92685 438 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 PCDHB18PQ96TA0 734 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 ZDHHC6Q9H6R6 413 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 PAIP2BQ9ULR5 123 aaKnown RBP16.54■□□□□ 0.24
SHTN1-202ENST00000355371 SNX6Q9UNH7 406 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 MYRFQ9Y2G1 1151 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 TDRKHQ9Y2W6 561 aaKnown RBP16.54■□□□□ 0.24
SHTN1-202ENST00000355371 OR6C75A6NL08 312 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 FAM20BO75063 409 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 SMNDC1O75940 238 aaKnown RBP eCLIP16.54■□□□□ 0.24
SHTN1-202ENST00000355371 SLURP2P0DP57 97 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 GABRB2P47870 512 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 TREML2Q5T2D2 321 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 POTEHQ6S545 545 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 HJURPQ8NCD3 748 aaPredicted RBP16.54■□□□□ 0.24
SHTN1-202ENST00000355371 UBE2E3Q969T4 207 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 FHDC1Q9C0D6 1143 aaPredicted RBP16.54■□□□□ 0.24
SHTN1-202ENST00000355371 ATP13A3Q9H7F0 1226 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 PCDH18Q9HCL0 1135 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 PALMDQ9NP74 551 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 GUCY1B2O75343 617 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 TCF3P15923 654 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 USP41Q3LFD5 358 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 IRGCQ6NXR0 463 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 MRPL45Q9BRJ2 306 aaKnown RBP16.54■□□□□ 0.24
SHTN1-202ENST00000355371 ASB8Q9H765 288 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 DUSP12Q9UNI6 340 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 NCKAP1Q9Y2A7 1128 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 RAP2CQ9Y3L5 183 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 QSOX1O00391 747 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 DDX3YO15523 660 aaKnown RBP16.54■□□□□ 0.24
SHTN1-202ENST00000355371 PGK1P00558 417 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 GRIA4P48058 902 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 ENPEPQ07075 957 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 OTUD3Q5T2D3 398 aaPredicted RBP16.54■□□□□ 0.24
SHTN1-202ENST00000355371 FBXL19Q6PCT2 694 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 AADATQ8N5Z0 425 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 RNF208Q9H0X6 261 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 FAM105AQ9NUU6 356 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 INVSQ9Y283 1065 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 TPRKBQ9Y3C4 175 aa16.54■□□□□ 0.24
SHTN1-202ENST00000355371 PLIN4Q96Q06 1357 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 EPN2O95208 641 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 BST1Q10588 318 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 LUZP2Q86TE4 346 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 EXOC3L1Q86VI1 746 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 C12orf29Q8N999 325 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 ZNF184Q99676 751 aaPredicted RBP16.53■□□□□ 0.24
SHTN1-202ENST00000355371 SEMA3CQ99985 751 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 ADAM30Q9UKF2 790 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 HGSNATQ68CP4 663 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 CYP2R1Q6VVX0 501 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 DHRSXQ8N5I4 330 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 SUSD6Q92537 303 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 LGMNQ99538 433 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 PEX1O43933 1283 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 DLGAP3O95886 979 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 TMED10P49755 219 aaKnown RBP16.53■□□□□ 0.24
SHTN1-202ENST00000355371 SMARCB1Q12824 385 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 COL9A3Q14050 684 aaPredicted RBP16.53■□□□□ 0.24
SHTN1-202ENST00000355371 ZNF544Q6NX49 715 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 TXNDC11Q6PKC3 985 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 CASP12Q6UXS9 341 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 TPGS1Q6ZTW0 290 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 CHMP1BQ7LBR1 199 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 STK32CQ86UX6 486 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 UTP15Q8TED0 518 aaKnown RBP16.53■□□□□ 0.24
SHTN1-202ENST00000355371 ARHGAP28Q9P2N2 729 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 C4BPAP04003 597 aaKnown RBP16.53■□□□□ 0.24
SHTN1-202ENST00000355371 DRD4P21917 467 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 ATP6V0D1P61421 351 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 EPS8Q12929 822 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 NOMO1Q15155 1222 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 LPCAT2Q7L5N7 544 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 ZDHHC13Q8IUH4 622 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 TMEM139Q8IV31 216 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 CCDC103Q8IW40 242 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 RNF148Q8N7C7 305 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 TRPC4APQ8TEL6 797 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 FNIP1Q8TF40 1166 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 LPPQ93052 612 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 MBOAT7Q96N66 472 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 MAN1C1Q9NR34 630 aa16.53■□□□□ 0.24
SHTN1-202ENST00000355371 ANAPC2Q9UJX6 822 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms