RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 GRM3Q14832 879 aa16.57■□□□□ 0.24
LITAF-201ENST00000339430 NET1Q7Z628 596 aaPredicted RBP16.57■□□□□ 0.24
LITAF-201ENST00000339430 NPAS4Q8IUM7 802 aa16.57■□□□□ 0.24
LITAF-201ENST00000339430 RSPH1Q8WYR4 309 aa16.57■□□□□ 0.24
LITAF-201ENST00000339430 ISL2Q96A47 359 aa16.57■□□□□ 0.24
LITAF-201ENST00000339430 PPP1R36Q96LQ0 422 aa16.57■□□□□ 0.24
LITAF-201ENST00000339430 IL22Q9GZX6 179 aa16.57■□□□□ 0.24
LITAF-201ENST00000339430 SOX13Q9UN79 622 aa16.57■□□□□ 0.24
LITAF-201ENST00000339430 MYLKQ15746 1914 aa16.57■□□□□ 0.24
LITAF-201ENST00000339430 MICAL3Q7RTP6 2002 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 LOC100653049A0A140TA62 436 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 TBKBP1A7MCY6 615 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 ERI2A8K979 691 aaKnown RBP16.56■□□□□ 0.24
LITAF-201ENST00000339430 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.56■□□□□ 0.24
LITAF-201ENST00000339430 PHGDHO43175 533 aaKnown RBP16.56■□□□□ 0.24
LITAF-201ENST00000339430 MTSS1O43312 755 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 KRT34O76011 436 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 ODC1P11926 461 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 ACADSP16219 412 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 NPY2RP49146 381 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 ZSCAN18Q8TBC5 510 aaPredicted RBP16.56■□□□□ 0.24
LITAF-201ENST00000339430 CSNK1G1Q9HCP0 422 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 DNAJC28Q9NX36 388 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 RRN3Q9NYV6 651 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 NUDT5Q9UKK9 219 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 HOXA2O43364 376 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 ZMPSTE24O75844 475 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 SMNDC1O75940 238 aaKnown RBP eCLIP16.56■□□□□ 0.24
LITAF-201ENST00000339430 SORBS2O94875 1100 aaKnown RBP16.56■□□□□ 0.24
LITAF-201ENST00000339430 KLHL2O95198 593 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 MPOP05164 745 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 GLRBP48167 497 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 CDH17Q12864 832 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 PRPSAP1Q14558 356 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 POU6F1Q14863 301 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 INTS6LQ5JSJ4 861 aaKnown RBP16.56■□□□□ 0.24
LITAF-201ENST00000339430 CFAP157Q5JU67 520 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 C6orf163Q5TEZ5 329 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 PM20D1Q6GTS8 502 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 UBE2Q1Q7Z7E8 422 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 LRRTM3Q86VH5 581 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 PHTF2Q8N3S3 785 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 ZNF419Q96HQ0 510 aaPredicted RBP16.56■□□□□ 0.24
LITAF-201ENST00000339430 BRD8Q9H0E9 1235 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 STN1Q9H668 368 aaKnown RBP16.56■□□□□ 0.24
LITAF-201ENST00000339430 COG4Q9H9E3 785 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 CYP4F11Q9HBI6 524 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 NMRAL1Q9HBL8 299 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 SFMBT1Q9UHJ3 866 aa16.56■□□□□ 0.24
LITAF-201ENST00000339430 A0A088AWK7 358 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 E9PBE3 544 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 M0QZQ0 153 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 TK2O00142 265 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 MSI1O43347 362 aaKnown RBP16.55■□□□□ 0.24
LITAF-201ENST00000339430 KLHL41O60662 606 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 PAX7P23759 505 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 CCR10P46092 362 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 PGFP49763 221 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 SLC9B1Q4ZJI4 515 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 KDELC2Q7Z4H8 507 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 CLEC14AQ86T13 490 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 LMNTD2Q8IXW0 634 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 IPMKQ8NFU5 416 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 OR10T2Q8NGX3 314 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 TASP1Q9H6P5 420 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 SORCS3Q9UPU3 1222 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 PCDHB12Q9Y5F1 795 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 MAGEB16A2A368 324 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 DCXO43602 365 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 TIMM44O43615 452 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 BAG2O95816 211 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 ACRP10323 421 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 GCKP35557 465 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 COPAP53621 1224 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 EPHB1P54762 984 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 TRMT5Q32P41 509 aaKnown RBP16.55■□□□□ 0.24
LITAF-201ENST00000339430 NAPEPLDQ6IQ20 393 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 EFCAB3Q8N7B9 438 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 OR6Y1Q8NGX8 325 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 MAPK15Q8TD08 544 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 DPF3Q92784 378 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 SUSD3Q96L08 255 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 VAT1Q99536 393 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 TTC1Q99614 292 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 C1orf21Q9H246 121 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 DMAP1Q9NPF5 467 aaPredicted RBP16.55■□□□□ 0.24
LITAF-201ENST00000339430 NDFIP2Q9NV92 336 aa16.55■□□□□ 0.24
LITAF-201ENST00000339430 F8W8V4 182 aa16.54■□□□□ 0.24
LITAF-201ENST00000339430 PDE5AO76074 875 aa16.54■□□□□ 0.24
LITAF-201ENST00000339430 CHRNGP07510 517 aa16.54■□□□□ 0.24
LITAF-201ENST00000339430 ALOX15P16050 662 aaPredicted RBP16.54■□□□□ 0.24
LITAF-201ENST00000339430 ACTR3P61158 418 aa16.54■□□□□ 0.24
LITAF-201ENST00000339430 ZNF460Q14592 562 aa16.54■□□□□ 0.24
LITAF-201ENST00000339430 TMCO2Q7Z6W1 182 aaPredicted RBP16.54■□□□□ 0.24
LITAF-201ENST00000339430 METTL23Q86XA0 190 aa16.54■□□□□ 0.24
LITAF-201ENST00000339430 TMEM199Q8N511 208 aa16.54■□□□□ 0.24
LITAF-201ENST00000339430 ATPAF2Q8N5M1 289 aa16.54■□□□□ 0.24
LITAF-201ENST00000339430 UNKQ9C0B0 810 aaKnown RBP16.54■□□□□ 0.24
LITAF-201ENST00000339430 CDH19Q9H159 772 aa16.54■□□□□ 0.24
LITAF-201ENST00000339430 SUFUQ9UMX1 484 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms