RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 GAREM2Q75VX8 874 aa22.76■■□□□ 1.23
PDLIM2-203ENST00000339162 SPRED2Q7Z698 418 aa22.76■■□□□ 1.23
PDLIM2-203ENST00000339162 PIGWQ7Z7B1 504 aa22.76■■□□□ 1.23
PDLIM2-203ENST00000339162 UBE2Q1Q7Z7E8 422 aa22.76■■□□□ 1.23
PDLIM2-203ENST00000339162 TEX26Q8N6G2 289 aa22.76■■□□□ 1.23
PDLIM2-203ENST00000339162 SLCO1B3Q9NPD5 702 aa22.76■■□□□ 1.23
PDLIM2-203ENST00000339162 ENTPD7Q9NQZ7 604 aa22.76■■□□□ 1.23
PDLIM2-203ENST00000339162 TXNDC16Q9P2K2 825 aa22.76■■□□□ 1.23
PDLIM2-203ENST00000339162 CARNS1A5YM72 827 aa22.76■■□□□ 1.23
PDLIM2-203ENST00000339162 HIDE1A8MVS5 230 aa22.76■■□□□ 1.23
PDLIM2-203ENST00000339162 TM9SF1O15321 606 aa22.76■■□□□ 1.23
PDLIM2-203ENST00000339162 PPP3CCP48454 512 aa22.76■■□□□ 1.23
PDLIM2-203ENST00000339162 IFT88Q13099 833 aa22.76■■□□□ 1.23
PDLIM2-203ENST00000339162 ITIH5Q86UX2 942 aa22.76■■□□□ 1.23
PDLIM2-203ENST00000339162 KCNMB4Q86W47 210 aa22.76■■□□□ 1.23
PDLIM2-203ENST00000339162 BHMTQ93088 406 aa22.76■■□□□ 1.23
PDLIM2-203ENST00000339162 MTBPQ96DY7 904 aa22.76■■□□□ 1.23
PDLIM2-203ENST00000339162 CDH23Q9H251 3354 aa22.75■■□□□ 1.23
PDLIM2-203ENST00000339162 HOXD9P28356 352 aaPredicted RBP22.75■■□□□ 1.23
PDLIM2-203ENST00000339162 MPP3Q13368 585 aa22.75■■□□□ 1.23
PDLIM2-203ENST00000339162 PDK4Q16654 411 aa22.75■■□□□ 1.23
PDLIM2-203ENST00000339162 HERC6Q8IVU3 1022 aa22.75■■□□□ 1.23
PDLIM2-203ENST00000339162 C7orf61Q8IZ16 206 aa22.75■■□□□ 1.23
PDLIM2-203ENST00000339162 NDUFAF2Q8N183 169 aa22.75■■□□□ 1.23
PDLIM2-203ENST00000339162 MAB21L3Q8N8X9 362 aa22.75■■□□□ 1.23
PDLIM2-203ENST00000339162 FATE1Q969F0 183 aa22.75■■□□□ 1.23
PDLIM2-203ENST00000339162 CABS1Q96KC9 395 aa22.75■■□□□ 1.23
PDLIM2-203ENST00000339162 KIFC1Q9BW19 673 aa22.75■■□□□ 1.23
PDLIM2-203ENST00000339162 NSRP1Q9H0G5 558 aaKnown RBP22.75■■□□□ 1.23
PDLIM2-203ENST00000339162 CPQQ9Y646 472 aa22.75■■□□□ 1.23
PDLIM2-203ENST00000339162 TLL1O43897 1013 aa22.74■■□□□ 1.23
PDLIM2-203ENST00000339162 LRG1P02750 347 aa22.74■■□□□ 1.23
PDLIM2-203ENST00000339162 ALDOAP04075 364 aaKnown RBP22.74■■□□□ 1.23
PDLIM2-203ENST00000339162 C8AP07357 584 aa22.74■■□□□ 1.23
PDLIM2-203ENST00000339162 ITGA2BP08514 1039 aa22.74■■□□□ 1.23
PDLIM2-203ENST00000339162 PCID2Q5JVF3 399 aa22.74■■□□□ 1.23
PDLIM2-203ENST00000339162 TEDDM1Q5T9Z0 273 aa22.74■■□□□ 1.23
PDLIM2-203ENST00000339162 PLPP4Q5VZY2 271 aa22.74■■□□□ 1.23
PDLIM2-203ENST00000339162 STRA8Q7Z7C7 330 aa22.74■■□□□ 1.23
PDLIM2-203ENST00000339162 ARRDC2Q8TBH0 407 aa22.74■■□□□ 1.23
PDLIM2-203ENST00000339162 ADAMTS19Q8TE59 1207 aa22.74■■□□□ 1.23
PDLIM2-203ENST00000339162 IQCGQ9H095 443 aaKnown RBP22.74■■□□□ 1.23
PDLIM2-203ENST00000339162 PDFQ9HBH1 243 aa22.74■■□□□ 1.23
PDLIM2-203ENST00000339162 IARS2Q9NSE4 1012 aaKnown RBP22.74■■□□□ 1.23
PDLIM2-203ENST00000339162 SLC2A6Q9UGQ3 507 aa22.74■■□□□ 1.23
PDLIM2-203ENST00000339162 PLXNA4Q9HCM2 1894 aa22.74■■□□□ 1.23
PDLIM2-203ENST00000339162 AP3B1O00203 1094 aa22.74■■□□□ 1.23
PDLIM2-203ENST00000339162 SEPT6Q14141 434 aa22.74■■□□□ 1.23
PDLIM2-203ENST00000339162 STXBP5Q5T5C0 1151 aa22.74■■□□□ 1.23
PDLIM2-203ENST00000339162 PKN3Q6P5Z2 889 aa22.74■■□□□ 1.23
PDLIM2-203ENST00000339162 LILRA6Q6PI73 481 aa22.74■■□□□ 1.23
PDLIM2-203ENST00000339162 SLC22A17Q8WUG5 538 aa22.74■■□□□ 1.23
PDLIM2-203ENST00000339162 THOC1Q96FV9 657 aaKnown RBP22.74■■□□□ 1.23
PDLIM2-203ENST00000339162 SEMA3CQ99985 751 aa22.74■■□□□ 1.23
PDLIM2-203ENST00000339162 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 TPP1O14773 563 aa22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 CLDN11O75508 207 aa22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 DNAJB1P25685 340 aa22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 CTNNB1P35222 781 aa22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 GMPRP36959 345 aa22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 ETV4P43268 484 aa22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 CREMQ03060 361 aa22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 ZNF177Q13360 481 aaPredicted RBP22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 ZNF235Q14590 738 aa22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 TMCO4Q5TGY1 634 aa22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 CGB2Q6NT52 195 aa22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 ESRP1Q6NXG1 681 aaKnown RBP22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 LRRC8CQ8TDW0 803 aa22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 RAD9AQ99638 391 aa22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 MAGEH1Q9H213 219 aa22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 SLC4A7Q9Y6M7 1214 aa22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 MYO7AQ13402 2215 aa22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 E2F8A0AVK6 867 aa22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 SNX3O60493 162 aa22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 RHOCP08134 193 aa22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 GP5P40197 560 aa22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 PDE1BQ01064 536 aa22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 CCDC197Q8NCU1 140 aa22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 KREMEN2Q8NCW0 462 aa22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 ZNF75CPQ92670 426 aaPredicted RBP22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 PPP1R2P1Q96PQ5 205 aa22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 PITPNM3Q9BZ71 974 aa22.73■■□□□ 1.23
PDLIM2-203ENST00000339162 RANBP2P49792 3224 aaKnown RBP22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 A0A1W2PRU2 124 aa22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 ADH1AP07327 375 aa22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 CNTFP26441 200 aa22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 CCNFP41002 786 aa22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 PABPC1LQ4VXU2 614 aaKnown RBP22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 PPHLN1Q8NEY8 458 aaKnown RBP22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 PTPRN2Q92932 1015 aa22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 CPNE1Q99829 537 aa22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 ATP13A1Q9HD20 1204 aa22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 SSX2IPQ9Y2D8 614 aa22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 PDE4DIPQ5VU43 2346 aa22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 A0A1B0GVM2 712 aa22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 TCAF2A6NFQ2 919 aa22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 CBX4O00257 560 aa22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 CCL16O15467 120 aa22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 VAPBO95292 243 aa22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 CKMP06732 381 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms