RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 CCNT2O60583 730 aaKnown RBP10.26□□□□□ -0.77
HIF1A-202ENST00000337138 DNAJA2O60884 412 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 USP2O75604 605 aaPredicted RBP10.26□□□□□ -0.77
HIF1A-202ENST00000337138 JUNP05412 331 aaKnown RBP10.26□□□□□ -0.77
HIF1A-202ENST00000337138 PSMC3P17980 439 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 RPS12P25398 132 aaKnown RBP10.26□□□□□ -0.77
HIF1A-202ENST00000337138 CXCR3P49682 368 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 SNX16P57768 344 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 EIF4EBP2Q13542 120 aaPredicted RBP10.26□□□□□ -0.77
HIF1A-202ENST00000337138 TBCCQ15814 346 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 USP41Q3LFD5 358 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 LSM12Q3MHD2 195 aaKnown RBP10.26□□□□□ -0.77
HIF1A-202ENST00000337138 GK5Q6ZS86 529 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 PIGZQ86VD9 579 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 KCNMB4Q86W47 210 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 PQLC1Q8N2U9 271 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 SPATA22Q8NHS9 363 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 GIPC3Q8TF64 312 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 LRRC39Q96DD0 335 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 ACE2Q9BYF1 805 aaPredicted RBP10.26□□□□□ -0.77
HIF1A-202ENST00000337138 FRMD8Q9BZ67 464 aaPredicted RBP10.26□□□□□ -0.77
HIF1A-202ENST00000337138 CYP3A43Q9HB55 503 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 USP34Q70CQ2 3546 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 MIA3Q5JRA6 1907 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 KIAA1671Q9BY89 1806 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 A0A1B0GTW7 788 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 TARM1B6A8C7 271 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 CCL22O00626 93 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 FAM58BPP0C7Q3 252 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 FDFT1P37268 417 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 EIF2B2P49770 351 aaKnown RBP10.26□□□□□ -0.77
HIF1A-202ENST00000337138 PDAP1Q13442 181 aaKnown RBP10.26□□□□□ -0.77
HIF1A-202ENST00000337138 FBXO48Q5FWF7 155 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 HFE2Q6ZVN8 426 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 ARMCX6Q7L4S7 300 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 OTOP3Q7RTS5 596 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 ELMO2Q96JJ3 720 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 CDH19Q9H159 772 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 WDR41Q9HAD4 459 aa10.26□□□□□ -0.77
HIF1A-202ENST00000337138 GNEQ9Y223 722 aaKnown RBP10.26□□□□□ -0.77
HIF1A-202ENST00000337138 FAM72CH0Y354 149 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 BOLA2-SMG1P6H3BVE0 249 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 TGFB3P10600 412 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 CYP2C8P10632 490 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 THRAP10827 490 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 TTLL4Q14679 1199 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 GRM3Q14832 879 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 FAM72AQ5TYM5 149 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 FAM72DQ6L9T8 149 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 ZNF554Q86TJ5 538 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 FAM72BQ86X60 149 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 DENND6AQ8IWF6 608 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 MYO1HQ8N1T3 1032 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 ATP6V1E2Q96A05 226 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 SLC39A3Q9BRY0 314 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 TMA7Q9Y2S6 64 aaKnown RBP10.25□□□□□ -0.77
HIF1A-202ENST00000337138 LAMA3Q16787 3333 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 ADM5C9JUS6 153 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 HUS1O60921 280 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 ERCC2P18074 760 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 NFKB1P19838 968 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 ADCYAP1R1P41586 468 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 HARS2P49590 506 aaKnown RBP10.25□□□□□ -0.77
HIF1A-202ENST00000337138 PTK2BQ14289 1009 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 CSHL1Q14406 222 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 KCTD11Q693B1 232 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 DDHD1Q8NEL9 900 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 BEST2Q8NFU1 509 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 APBB2Q92870 758 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 ZNF419Q96HQ0 510 aaPredicted RBP10.25□□□□□ -0.77
HIF1A-202ENST00000337138 LRRC40Q9H9A6 602 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 TXNRD2Q9NNW7 524 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 RRN3Q9NYV6 651 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 CDYLQ9Y232 598 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 SAC3D1A6NKF1 404 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 FOXD2O60548 495 aaPredicted RBP10.25□□□□□ -0.77
HIF1A-202ENST00000337138 MAP4P27816 1152 aaKnown RBP10.25□□□□□ -0.77
HIF1A-202ENST00000337138 NMBRP28336 390 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 DMPKQ09013 629 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 SEMA3BQ13214 749 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 NADK2Q4G0N4 442 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 AGKQ53H12 422 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 BHLHA9Q7RTU4 235 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 KBTBD7Q8WVZ9 684 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 VPS39Q96JC1 886 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 TRPC7Q9HCX4 862 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 SH3GLB1Q9Y371 365 aa10.25□□□□□ -0.77
HIF1A-202ENST00000337138 ARHGEF37A1IGU5 675 aa10.24□□□□□ -0.77
HIF1A-202ENST00000337138 KCNU1A8MYU2 1149 aa10.24□□□□□ -0.77
HIF1A-202ENST00000337138 AKAP10O43572 662 aa10.24□□□□□ -0.77
HIF1A-202ENST00000337138 TNFAIP8O95379 198 aa10.24□□□□□ -0.77
HIF1A-202ENST00000337138 CRTAMO95727 393 aa10.24□□□□□ -0.77
HIF1A-202ENST00000337138 MT-CYBP00156 380 aaPredicted RBP10.24□□□□□ -0.77
HIF1A-202ENST00000337138 TFEBP19484 476 aa10.24□□□□□ -0.77
HIF1A-202ENST00000337138 ZNF157P51786 506 aaPredicted RBP10.24□□□□□ -0.77
HIF1A-202ENST00000337138 MPP1Q00013 466 aa10.24□□□□□ -0.77
HIF1A-202ENST00000337138 PLIN5Q00G26 463 aa10.24□□□□□ -0.77
HIF1A-202ENST00000337138 ZBTB17Q13105 803 aa10.24□□□□□ -0.77
HIF1A-202ENST00000337138 EMID1Q96A84 441 aaPredicted RBP10.24□□□□□ -0.77
HIF1A-202ENST00000337138 QKIQ96PU8 341 aaKnown RBP eCLIP10.24□□□□□ -0.777e-7■■■■■ 29
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms