RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 TXNDC9O14530 226 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 DDHD2O94830 711 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 F2P00734 622 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 GSTT1P30711 240 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 ALDH1A3P47895 512 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 TRIM32Q13049 653 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 SLC12A1Q13621 1099 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 GRM2Q14416 872 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 PDK3Q15120 406 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 RBBP5Q15291 538 aaKnown RBP15.59■□□□□ 0.09
BRCC3-201ENST00000330045 CTU1Q7Z7A3 348 aaKnown RBP15.59■□□□□ 0.09
BRCC3-201ENST00000330045 LINC00523Q86TU6 105 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 SETD3Q86TU7 594 aaPredicted RBP15.59■□□□□ 0.09
BRCC3-201ENST00000330045 PQLC1Q8N2U9 271 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 CPSF7Q8N684 471 aaKnown RBP15.59■□□□□ 0.09
BRCC3-201ENST00000330045 KCTD4Q8WVF5 259 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 CDRT15Q96T59 188 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 TKTL2Q9H0I9 626 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 VTI1BQ9UEU0 232 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 TBC1D30Q9Y2I9 924 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 SLCO1B7G3V0H7 640 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 PTGESO14684 152 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 SLC22A2O15244 555 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 LRIG2O94898 1065 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 SNUPNO95149 360 aaKnown RBP15.59■□□□□ 0.09
BRCC3-201ENST00000330045 F9P00740 461 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 AHSGP02765 367 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 SLC35E2BP0CK96 405 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 DNAJB2P25686 324 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 PPARGP37231 505 aaPredicted RBP15.59■□□□□ 0.09
BRCC3-201ENST00000330045 AVPR1AP37288 418 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 CNPY1Q3B7I2 92 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 BNC2Q6ZN30 1099 aaPredicted RBP15.59■□□□□ 0.09
BRCC3-201ENST00000330045 FAM35AQ86V20 835 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 LCA5Q86VQ0 697 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 FSTL5Q8N475 847 aaPredicted RBP15.59■□□□□ 0.09
BRCC3-201ENST00000330045 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.59■□□□□ 0.09
BRCC3-201ENST00000330045 ZMIZ2Q8NF64 920 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 ZSCAN18Q8TBC5 510 aaPredicted RBP15.59■□□□□ 0.09
BRCC3-201ENST00000330045 STYXQ8WUJ0 223 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 CELF6Q96J87 481 aaKnown RBP15.59■□□□□ 0.09
BRCC3-201ENST00000330045 RRN3Q9NYV6 651 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 DTNAQ9Y4J8 743 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 NUP205Q92621 2012 aa15.59■□□□□ 0.09
BRCC3-201ENST00000330045 PSMD3O43242 534 aa15.58■□□□□ 0.09
BRCC3-201ENST00000330045 ZNF135P52742 658 aaPredicted RBP15.58■□□□□ 0.09
BRCC3-201ENST00000330045 FOLH1Q04609 750 aa15.58■□□□□ 0.09
BRCC3-201ENST00000330045 RAB41Q5JT25 222 aa15.58■□□□□ 0.09
BRCC3-201ENST00000330045 OTOP3Q7RTS5 596 aa15.58■□□□□ 0.09
BRCC3-201ENST00000330045 PIP4K2CQ8TBX8 421 aa15.58■□□□□ 0.09
BRCC3-201ENST00000330045 EDEM1Q92611 657 aa15.58■□□□□ 0.09
BRCC3-201ENST00000330045 PCED1BQ96HM7 432 aa15.58■□□□□ 0.09
BRCC3-201ENST00000330045 SENP8Q96LD8 212 aa15.58■□□□□ 0.09
BRCC3-201ENST00000330045 CDYLQ9Y232 598 aa15.58■□□□□ 0.09
BRCC3-201ENST00000330045 TRIP12Q14669 1992 aaPredicted RBP15.58■□□□□ 0.08
BRCC3-201ENST00000330045 MYBPHLA2RUH7 354 aa15.58■□□□□ 0.08
BRCC3-201ENST00000330045 CAPN8A6NHC0 703 aa15.58■□□□□ 0.08
BRCC3-201ENST00000330045 COL6A2P12110 1019 aa15.58■□□□□ 0.08
BRCC3-201ENST00000330045 GABRB3P28472 473 aa15.58■□□□□ 0.08
BRCC3-201ENST00000330045 ADSLP30566 484 aaPredicted RBP15.58■□□□□ 0.08
BRCC3-201ENST00000330045 THOP1P52888 689 aa15.58■□□□□ 0.08
BRCC3-201ENST00000330045 ZNF423Q2M1K9 1284 aa15.58■□□□□ 0.08
BRCC3-201ENST00000330045 AP1ARQ63HQ0 302 aa15.58■□□□□ 0.08
BRCC3-201ENST00000330045 NXNQ6DKJ4 435 aa15.58■□□□□ 0.08
BRCC3-201ENST00000330045 SLC41A1Q8IVJ1 513 aa15.58■□□□□ 0.08
BRCC3-201ENST00000330045 CNTD1Q8N815 330 aa15.58■□□□□ 0.08
BRCC3-201ENST00000330045 USP33Q8TEY7 942 aa15.58■□□□□ 0.08
BRCC3-201ENST00000330045 DPF3Q92784 378 aa15.58■□□□□ 0.08
BRCC3-201ENST00000330045 RCN3Q96D15 328 aa15.58■□□□□ 0.08
BRCC3-201ENST00000330045 ZFP42Q96MM3 310 aa15.58■□□□□ 0.08
BRCC3-201ENST00000330045 CATSPER2Q96P56 530 aa15.58■□□□□ 0.08
BRCC3-201ENST00000330045 GCNAQ96QF7 691 aa15.58■□□□□ 0.08
BRCC3-201ENST00000330045 ZNF385DQ9H6B1 395 aa15.58■□□□□ 0.08
BRCC3-201ENST00000330045 ZFYVE28Q9HCC9 887 aa15.58■□□□□ 0.08
BRCC3-201ENST00000330045 TMEM30AQ9NV96 361 aa15.58■□□□□ 0.08
BRCC3-201ENST00000330045 CACNG4Q9UBN1 327 aa15.58■□□□□ 0.08
BRCC3-201ENST00000330045 VPS28Q9UK41 221 aa15.58■□□□□ 0.08
BRCC3-201ENST00000330045 SHROOM3Q8TF72 1996 aa15.58■□□□□ 0.08
BRCC3-201ENST00000330045 TARM1B6A8C7 271 aa15.57■□□□□ 0.08
BRCC3-201ENST00000330045 TREHO43280 583 aa15.57■□□□□ 0.08
BRCC3-201ENST00000330045 AOC2O75106 756 aa15.57■□□□□ 0.08
BRCC3-201ENST00000330045 MYL3P08590 195 aa15.57■□□□□ 0.08
BRCC3-201ENST00000330045 CXCR3P49682 368 aa15.57■□□□□ 0.08
BRCC3-201ENST00000330045 CHN2P52757 468 aa15.57■□□□□ 0.08
BRCC3-201ENST00000330045 FLOT2Q14254 428 aa15.57■□□□□ 0.08
BRCC3-201ENST00000330045 UGP2Q16851 508 aa15.57■□□□□ 0.08
BRCC3-201ENST00000330045 PIGGQ5H8A4 983 aa15.57■□□□□ 0.08
BRCC3-201ENST00000330045 PCID2Q5JVF3 399 aa15.57■□□□□ 0.08
BRCC3-201ENST00000330045 TMEM198Q66K66 360 aa15.57■□□□□ 0.08
BRCC3-201ENST00000330045 TWF2Q6IBS0 349 aaKnown RBP15.57■□□□□ 0.08
BRCC3-201ENST00000330045 LRRC8EQ6NSJ5 796 aa15.57■□□□□ 0.08
BRCC3-201ENST00000330045 FBXL19Q6PCT2 694 aa15.57■□□□□ 0.08
BRCC3-201ENST00000330045 CENPLQ8N0S6 344 aaPredicted RBP15.57■□□□□ 0.08
BRCC3-201ENST00000330045 LSMEM2Q8N112 164 aa15.57■□□□□ 0.08
BRCC3-201ENST00000330045 STON2Q8WXE9 905 aa15.57■□□□□ 0.08
BRCC3-201ENST00000330045 PPP1R10Q96QC0 940 aaKnown RBP15.57■□□□□ 0.08
BRCC3-201ENST00000330045 ACOT9Q9Y305 439 aa15.57■□□□□ 0.08
BRCC3-201ENST00000330045 DLX3O60479 287 aa15.57■□□□□ 0.08
BRCC3-201ENST00000330045 LHX1P48742 406 aa15.57■□□□□ 0.08
BRCC3-201ENST00000330045 ADAM17P78536 824 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms