RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 SEPT8Q92599 483 aa13.96□□□□□ -0.18
DNMT3B-202ENST00000328111 PCED1BQ96HM7 432 aa13.96□□□□□ -0.18
DNMT3B-202ENST00000328111 PPP1R10Q96QC0 940 aaKnown RBP13.96□□□□□ -0.18
DNMT3B-202ENST00000328111 ACOX2Q99424 681 aa13.96□□□□□ -0.18
DNMT3B-202ENST00000328111 HNRNPABQ99729 332 aaKnown RBP13.96□□□□□ -0.18
DNMT3B-202ENST00000328111 RNF39Q9H2S5 420 aa13.96□□□□□ -0.18
DNMT3B-202ENST00000328111 TAS2R1Q9NYW7 299 aa13.96□□□□□ -0.18
DNMT3B-202ENST00000328111 TMEM216Q9P0N5 145 aa13.96□□□□□ -0.18
DNMT3B-202ENST00000328111 NDUFAF1Q9Y375 327 aa13.96□□□□□ -0.18
DNMT3B-202ENST00000328111 ATG7O95352 703 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 DDX53Q86TM3 631 aaKnown RBP13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 RNF168Q8IYW5 571 aaPredicted RBP13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 BHLHE22Q8NFJ8 381 aaPredicted RBP13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 MIEF2Q96C03 454 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 SLC25A23Q9BV35 468 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 XYLT2Q9H1B5 865 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 GLOD4Q9HC38 313 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 NMRK1Q9NWW6 199 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 C4AP0C0L4 1744 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 C4BP0C0L5 1744 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 LGR5O75473 907 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 USP1O94782 785 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 TGDSO95455 350 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 ITGALP20701 1170 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 ATP6V1C1P21283 382 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 MPSTP25325 297 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 KHDC1Q4VXA5 237 aaKnown RBP13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 POTEHQ6S545 545 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 DHFR2Q86XF0 187 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 MYO1HQ8N1T3 1032 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 ZNF555Q8NEP9 628 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 ARHGEF3Q9NR81 526 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 UXTQ9UBK9 157 aaPredicted RBP13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 UBA2Q9UBT2 640 aaPredicted RBP13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 SEPT3Q9UH03 358 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 ZNF112Q9UJU3 913 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 GIT1Q9Y2X7 761 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 KPNA1P52294 538 aaPredicted RBP13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 GTF2H3Q13889 308 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 OLFML2BQ68BL8 750 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 CDCA2Q69YH5 1023 aaPredicted RBP13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 C16orf59Q7L2K0 433 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 FNDC5Q8NAU1 212 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 METTL6Q8TCB7 284 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 DQX1Q8TE96 717 aaKnown RBP13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 FAXDC2Q96IV6 333 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 TMEM79Q9BSE2 394 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 ZYG11BQ9C0D3 744 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 SEMA4BQ9NPR2 832 aaPredicted RBP13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 RPL26L1Q9UNX3 145 aaKnown RBP13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 TJP1Q07157 1748 aa13.95□□□□□ -0.18
DNMT3B-202ENST00000328111 TMEM247A6NEH6 219 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 EVPLLA8MZ36 301 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 AP2A1O95782 977 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 MT-CYBP00156 380 aaPredicted RBP13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 BFSP2Q13515 415 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 DLG2Q15700 870 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 DPYSL2Q16555 572 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 NRF1Q16656 503 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 SYPL2Q5VXT5 272 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 ARHGAP17Q68EM7 881 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 GRAMD4Q6IC98 578 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 C15orf39Q6ZRI6 1047 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 TMEM110Q86TL2 294 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 PTGR2Q8N8N7 351 aaPredicted RBP13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 DCAKDQ8WVC6 231 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 MRPS31Q92665 395 aaKnown RBP13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 CADM1Q9BY67 442 aaKnown RBP13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 BCO2Q9BYV7 579 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 SLC13A4Q9UKG4 626 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 EIF3LQ9Y262 564 aaKnown RBP13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 CHD4Q14839 1912 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 A0A087X1B8 175 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 SYNCRIPO60506 623 aaKnown RBP13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 CHRNB3Q05901 458 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 MSLNQ13421 630 aaPredicted RBP13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 UBAP2Q5T6F2 1119 aaKnown RBP13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 C10orf82Q8WW14 230 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 RBBP8Q99708 897 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 ZNF395Q9H8N7 513 aaPredicted RBP13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 PCDHB8Q9UN66 801 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 ITGB4P16144 1822 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 A8MX80 341 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 SMNDC1O75940 238 aaKnown RBP eCLIP13.94□□□□□ -0.189e-31■■■□□ 17.7
DNMT3B-202ENST00000328111 TUSC3Q13454 348 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 OTUD3Q5T2D3 398 aaPredicted RBP13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 SLC4A5Q9BY07 1137 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 RTN3O95197 1032 aaPredicted RBP13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 LRPAP1P30533 357 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 GRM3Q14832 879 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 SIX1Q15475 284 aaPredicted RBP13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 FSTL4Q6MZW2 842 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 ZFP1Q6P2D0 407 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 DCLRE1AQ6PJP8 1040 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 DNAJC14Q6Y2X3 702 aaPredicted RBP13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 PIWIL1Q96J94 861 aaKnown RBP13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 AGAP2Q99490 1192 aa13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 MRPL57Q9BQC6 102 aaKnown RBP13.94□□□□□ -0.18
DNMT3B-202ENST00000328111 CDH19Q9H159 772 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms