RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 FZD3Q9NPG1 666 aa14.4□□□□□ -0.1
RPAIN-201ENST00000327154 LIMA1Q9UHB6 759 aaKnown RBP14.4□□□□□ -0.1
RPAIN-201ENST00000327154 LHX6Q9UPM6 363 aa14.4□□□□□ -0.1
RPAIN-201ENST00000327154 DAAM1Q9Y4D1 1078 aa14.4□□□□□ -0.1
RPAIN-201ENST00000327154 PLXNB3Q9ULL4 1909 aa14.39□□□□□ -0.11
RPAIN-201ENST00000327154 LRRC10BA6NIK2 292 aa14.39□□□□□ -0.11
RPAIN-201ENST00000327154 LGALS16A8MUM7 142 aa14.39□□□□□ -0.11
RPAIN-201ENST00000327154 RFPL3O75679 317 aa14.39□□□□□ -0.11
RPAIN-201ENST00000327154 LRIG2O94898 1065 aa14.39□□□□□ -0.11
RPAIN-201ENST00000327154 C1SP09871 688 aa14.39□□□□□ -0.11
RPAIN-201ENST00000327154 JUPP14923 745 aa14.39□□□□□ -0.11
RPAIN-201ENST00000327154 AKT2P31751 481 aa14.39□□□□□ -0.11
RPAIN-201ENST00000327154 ACADVLP49748 655 aa14.39□□□□□ -0.11
RPAIN-201ENST00000327154 CCNHP51946 323 aaPredicted RBP14.39□□□□□ -0.11
RPAIN-201ENST00000327154 HDAC4P56524 1084 aa14.39□□□□□ -0.11
RPAIN-201ENST00000327154 CLDN6P56747 220 aa14.39□□□□□ -0.11
RPAIN-201ENST00000327154 CLDN2P57739 230 aa14.39□□□□□ -0.11
RPAIN-201ENST00000327154 MYL5Q02045 173 aa14.39□□□□□ -0.11
RPAIN-201ENST00000327154 ANO6Q4KMQ2 910 aa14.39□□□□□ -0.11
RPAIN-201ENST00000327154 FBXL19Q6PCT2 694 aa14.39□□□□□ -0.11
RPAIN-201ENST00000327154 WDR59Q6PJI9 974 aa14.39□□□□□ -0.11
RPAIN-201ENST00000327154 LEKR1Q6ZMV7 388 aa14.39□□□□□ -0.11
RPAIN-201ENST00000327154 NLRP14Q86W24 1093 aa14.39□□□□□ -0.11
RPAIN-201ENST00000327154 PHF13Q86YI8 300 aaPredicted RBP14.39□□□□□ -0.11
RPAIN-201ENST00000327154 PDCD7Q8N8D1 485 aaKnown RBP14.39□□□□□ -0.11
RPAIN-201ENST00000327154 FAM172AQ8WUF8 416 aa14.39□□□□□ -0.11
RPAIN-201ENST00000327154 ARHGEF2Q92974 986 aaKnown RBP14.39□□□□□ -0.11
RPAIN-201ENST00000327154 SELENOOQ9BVL4 669 aa14.39□□□□□ -0.11
RPAIN-201ENST00000327154 TM6SF2Q9BZW4 377 aa14.39□□□□□ -0.11
RPAIN-201ENST00000327154 SEPT11Q9NVA2 429 aaKnown RBP14.39□□□□□ -0.11
RPAIN-201ENST00000327154 TMEM248Q9NWD8 314 aa14.39□□□□□ -0.11
RPAIN-201ENST00000327154 RAXQ9Y2V3 346 aa14.39□□□□□ -0.11
RPAIN-201ENST00000327154 FREM2Q5SZK8 3169 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 PKD1L2Q7Z442 2459 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 SYCE3A1L190 88 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 TRIM38O00635 465 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 PAK4O96013 591 aaPredicted RBP14.38□□□□□ -0.11
RPAIN-201ENST00000327154 CDK4P11802 303 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 ADRB3P13945 408 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 GPD1P21695 349 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 HNRNPA2B1P22626 353 aaKnown RBP14.38□□□□□ -0.11
RPAIN-201ENST00000327154 ITGB7P26010 798 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 L1CAMP32004 1257 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 GKP32189 559 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 ETFBP38117 255 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 MAPKAPK2P49137 400 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 NEK3P51956 506 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 MAPK8IP2Q13387 824 aaPredicted RBP14.38□□□□□ -0.11
RPAIN-201ENST00000327154 SKOR2Q2VWA4 1001 aaPredicted RBP14.38□□□□□ -0.11
RPAIN-201ENST00000327154 TMEM259Q4ZIN3 620 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 SLC25A45Q8N413 288 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 RYBPQ8N488 228 aaPredicted RBP14.38□□□□□ -0.11
RPAIN-201ENST00000327154 OR13H1Q8NG92 308 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 OR6K2Q8NGY2 324 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 ISG20Q96AZ6 181 aaKnown RBP14.38□□□□□ -0.11
RPAIN-201ENST00000327154 TBC1D31Q96DN5 1066 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 FEM1CQ96JP0 617 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 AGPAT1Q99943 283 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 CALN1Q9BXU9 219 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 SLC17A9Q9BYT1 436 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 MAGEH1Q9H213 219 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 RETREG1Q9H6L5 497 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 ZDHHC6Q9H6R6 413 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 KLHL11Q9NVR0 708 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 HPCAL4Q9UM19 191 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 GPSM3Q9Y4H4 160 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 FADS3Q9Y5Q0 445 aa14.38□□□□□ -0.11
RPAIN-201ENST00000327154 SIGLEC16A6NMB1 481 aa14.37□□□□□ -0.11
RPAIN-201ENST00000327154 SIGLEC6O43699 453 aa14.37□□□□□ -0.11
RPAIN-201ENST00000327154 RAMP2O60895 175 aa14.37□□□□□ -0.11
RPAIN-201ENST00000327154 CALB1P05937 261 aa14.37□□□□□ -0.11
RPAIN-201ENST00000327154 CKMT2P17540 419 aa14.37□□□□□ -0.11
RPAIN-201ENST00000327154 DGKAP23743 735 aa14.37□□□□□ -0.11
RPAIN-201ENST00000327154 RPS21P63220 83 aaKnown RBP14.37□□□□□ -0.11
RPAIN-201ENST00000327154 FGL2Q14314 439 aa14.37□□□□□ -0.11
RPAIN-201ENST00000327154 NCAPHQ15003 741 aa14.37□□□□□ -0.11
RPAIN-201ENST00000327154 POLD3Q15054 466 aaPredicted RBP14.37□□□□□ -0.11
RPAIN-201ENST00000327154 SCYL2Q6P3W7 929 aa14.37□□□□□ -0.11
RPAIN-201ENST00000327154 Q6ZSR6 202 aa14.37□□□□□ -0.11
RPAIN-201ENST00000327154 SLFN11Q7Z7L1 901 aa14.37□□□□□ -0.11
RPAIN-201ENST00000327154 PLPP6Q8IY26 295 aa14.37□□□□□ -0.11
RPAIN-201ENST00000327154 PYROXD2Q8N2H3 581 aa14.37□□□□□ -0.11
RPAIN-201ENST00000327154 AOPEPQ8N6M6 819 aa14.37□□□□□ -0.11
RPAIN-201ENST00000327154 C3orf20Q8ND61 904 aa14.37□□□□□ -0.11
RPAIN-201ENST00000327154 HNRNPLLQ8WVV9 542 aaKnown RBP14.37□□□□□ -0.11
RPAIN-201ENST00000327154 BMFQ96LC9 184 aa14.37□□□□□ -0.11
RPAIN-201ENST00000327154 ERGIC2Q96RQ1 377 aa14.37□□□□□ -0.11
RPAIN-201ENST00000327154 NAT10Q9H0A0 1025 aaKnown RBP14.37□□□□□ -0.11
RPAIN-201ENST00000327154 HSD3B7Q9H2F3 369 aa14.37□□□□□ -0.11
RPAIN-201ENST00000327154 CAAP1Q9H8G2 361 aa14.37□□□□□ -0.11
RPAIN-201ENST00000327154 UCKL1Q9NWZ5 548 aa14.37□□□□□ -0.11
RPAIN-201ENST00000327154 DKK4Q9UBT3 224 aa14.37□□□□□ -0.11
RPAIN-201ENST00000327154 NEU3Q9UQ49 428 aa14.37□□□□□ -0.11
RPAIN-201ENST00000327154 HS3ST3A1Q9Y663 406 aa14.37□□□□□ -0.11
RPAIN-201ENST00000327154 PTPRBP23467 1997 aa14.36□□□□□ -0.11
RPAIN-201ENST00000327154 CXorf51AA0A1B0GTR3 108 aa14.36□□□□□ -0.11
RPAIN-201ENST00000327154 C16orf96A6NNT2 1141 aa14.36□□□□□ -0.11
RPAIN-201ENST00000327154 KRIT1O00522 736 aa14.36□□□□□ -0.11
RPAIN-201ENST00000327154 RAD51BO15315 384 aa14.36□□□□□ -0.11
RPAIN-201ENST00000327154 KDELR3O43731 214 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms