RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 ATE1O95260 518 aa18.12■□□□□ 0.49
PRKCB-202ENST00000321728 LCP1P13796 627 aa18.12■□□□□ 0.49
PRKCB-202ENST00000321728 PRKCQQ04759 706 aa18.12■□□□□ 0.49
PRKCB-202ENST00000321728 CERCAMQ5T4B2 595 aa18.12■□□□□ 0.49
PRKCB-202ENST00000321728 FSTL5Q8N475 847 aaPredicted RBP18.12■□□□□ 0.49
PRKCB-202ENST00000321728 C7orf31Q8N865 590 aa18.12■□□□□ 0.49
PRKCB-202ENST00000321728 TFAP2CQ92754 450 aa18.12■□□□□ 0.49
PRKCB-202ENST00000321728 TOP1MTQ969P6 601 aa18.12■□□□□ 0.49
PRKCB-202ENST00000321728 APOL2Q9BQE5 337 aa18.12■□□□□ 0.49
PRKCB-202ENST00000321728 CXorf21Q9HAI6 301 aa18.12■□□□□ 0.49
PRKCB-202ENST00000321728 SPAG4Q9NPE6 437 aa18.12■□□□□ 0.49
PRKCB-202ENST00000321728 CACNA2D2Q9NY47 1150 aa18.12■□□□□ 0.49
PRKCB-202ENST00000321728 SELENONQ9NZV5 590 aa18.12■□□□□ 0.49
PRKCB-202ENST00000321728 CCDC167Q9P0B6 97 aa18.12■□□□□ 0.49
PRKCB-202ENST00000321728 SYNJ2BP-COX16A0A087WUM0 186 aa18.12■□□□□ 0.49
PRKCB-202ENST00000321728 PRKAA2P54646 552 aa18.12■□□□□ 0.49
PRKCB-202ENST00000321728 LY6KQ17RY6 165 aa18.12■□□□□ 0.49
PRKCB-202ENST00000321728 SOWAHAQ2M3V2 549 aa18.12■□□□□ 0.49
PRKCB-202ENST00000321728 AGKQ53H12 422 aa18.12■□□□□ 0.49
PRKCB-202ENST00000321728 SLC35F5Q8WV83 523 aa18.12■□□□□ 0.49
PRKCB-202ENST00000321728 BORCS5Q969J3 196 aa18.12■□□□□ 0.49
PRKCB-202ENST00000321728 OMDQ99983 421 aa18.12■□□□□ 0.49
PRKCB-202ENST00000321728 VRTNQ9H8Y1 702 aa18.12■□□□□ 0.49
PRKCB-202ENST00000321728 CHRAC1Q9NRG0 131 aa18.12■□□□□ 0.49
PRKCB-202ENST00000321728 COX16Q9P0S2 106 aa18.12■□□□□ 0.49
PRKCB-202ENST00000321728 COQ6Q9Y2Z9 468 aa18.12■□□□□ 0.49
PRKCB-202ENST00000321728 USP3Q9Y6I4 520 aa18.12■□□□□ 0.49
PRKCB-202ENST00000321728 TCRBV3S1A0A5B6 114 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 TRPC5OSA6NMA1 111 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 DLX3O60479 287 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 OCM2P0CE71 109 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 OCMP0CE72 109 aaPredicted RBP18.11■□□□□ 0.49
PRKCB-202ENST00000321728 HSPA1AP0DMV8 641 aaKnown RBP18.11■□□□□ 0.49
PRKCB-202ENST00000321728 HSPA1BP0DMV9 641 aaKnown RBP18.11■□□□□ 0.49
PRKCB-202ENST00000321728 ARSAP15289 507 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 GLUD2P49448 558 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 C21orf59P57076 290 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 SNX16P57768 344 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 RELAQ04206 551 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 TMEM132DQ14C87 1099 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 TGFBIQ15582 683 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 GPR107Q5VW38 600 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 REP15Q6BDI9 236 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 PPP4R4Q6NUP7 873 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 C16orf87Q6PH81 154 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 XKR5Q6UX68 686 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 TP53INP2Q8IXH6 220 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 SPATA6LQ8N4H0 392 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 SNX31Q8N9S9 440 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 KDM1BQ8NB78 822 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 DDHD1Q8NEL9 900 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 FLAD1Q8NFF5 587 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 XPR1Q9UBH6 696 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 TNFSF13BQ9Y275 285 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 GJA3Q9Y6H8 435 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 FAM155AB1AL88 458 aaPredicted RBP18.11■□□□□ 0.49
PRKCB-202ENST00000321728 SDHDO14521 159 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 TRIM24O15164 1050 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 IQCF3P0C7M6 154 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 TPH1P17752 444 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 ETFBP38117 255 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 CSE1LP55060 971 aaKnown RBP18.11■□□□□ 0.49
PRKCB-202ENST00000321728 PHEXP78562 749 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 PFKPQ01813 784 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 TRAP1Q12931 704 aaKnown RBP18.11■□□□□ 0.49
PRKCB-202ENST00000321728 ZNF829Q3KNS6 432 aaPredicted RBP18.11■□□□□ 0.49
PRKCB-202ENST00000321728 C1QTNF12Q5T7M4 302 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 RWDD4Q6NW29 188 aaKnown RBP18.11■□□□□ 0.49
PRKCB-202ENST00000321728 SEPT1Q8WYJ6 367 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 CENPIQ92674 756 aaPredicted RBP18.11■□□□□ 0.49
PRKCB-202ENST00000321728 LPIN3Q9BQK8 851 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 C1QTNF1Q9BXJ1 281 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 UPF3AQ9H1J1 476 aaKnown RBP18.11■□□□□ 0.49
PRKCB-202ENST00000321728 TMPRSS4Q9NRS4 437 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 RNF19AQ9NV58 838 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 SLC38A7Q9NVC3 462 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 SMOXQ9NWM0 555 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 TUBA8Q9NY65 449 aaPredicted RBP18.11■□□□□ 0.49
PRKCB-202ENST00000321728 HACL1Q9UJ83 578 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 ZNF232Q9UNY5 417 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 ANKRD6Q9Y2G4 727 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 WDR37Q9Y2I8 494 aa18.11■□□□□ 0.49
PRKCB-202ENST00000321728 XPOTO43592 962 aaKnown RBP18.1■□□□□ 0.49
PRKCB-202ENST00000321728 GRIA3P42263 894 aa18.1■□□□□ 0.49
PRKCB-202ENST00000321728 OAZ1P54368 228 aa18.1■□□□□ 0.49
PRKCB-202ENST00000321728 LRP8Q14114 963 aa18.1■□□□□ 0.49
PRKCB-202ENST00000321728 FASTKQ14296 549 aaKnown RBP18.1■□□□□ 0.49
PRKCB-202ENST00000321728 PKDCCQ504Y2 493 aa18.1■□□□□ 0.49
PRKCB-202ENST00000321728 PDCD4Q53EL6 469 aaKnown RBP18.1■□□□□ 0.49
PRKCB-202ENST00000321728 DHFR2Q86XF0 187 aa18.1■□□□□ 0.49
PRKCB-202ENST00000321728 PSTKQ8IV42 348 aaKnown RBP18.1■□□□□ 0.49
PRKCB-202ENST00000321728 CBR4Q8N4T8 237 aa18.1■□□□□ 0.49
PRKCB-202ENST00000321728 FAM110BQ8TC76 370 aa18.1■□□□□ 0.49
PRKCB-202ENST00000321728 STYXQ8WUJ0 223 aa18.1■□□□□ 0.49
PRKCB-202ENST00000321728 CANT1Q8WVQ1 401 aa18.1■□□□□ 0.49
PRKCB-202ENST00000321728 SGF29Q96ES7 293 aa18.1■□□□□ 0.49
PRKCB-202ENST00000321728 PLEKHA8Q96JA3 519 aa18.1■□□□□ 0.49
PRKCB-202ENST00000321728 AURKCQ9UQB9 309 aa18.1■□□□□ 0.49
PRKCB-202ENST00000321728 SCN4AP35499 1836 aa18.1■□□□□ 0.49
PRKCB-202ENST00000321728 A0A1W2PPW3 197 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms