RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 AKAP3O75969 853 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 PIH1D2Q8WWB5 315 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 ELP3Q9H9T3 547 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 PTGFRNQ9P2B2 879 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 PSIP1O75475 530 aaKnown RBP17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 CST1P01037 141 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 TATDN2Q93075 761 aa17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 MRPS7Q9Y2R9 242 aaKnown RBP17.06■□□□□ 0.32
SMCHD1-201ENST00000320876 PLK4O00444 970 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 ACADMP11310 421 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 CYP2A6P11509 494 aaPredicted RBP17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 DGKAP23743 735 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 RP9Q8TA86 221 aaKnown RBP17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 RBAK-RBAKDNI3L0D1 243 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 VAPBO95292 243 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 POLD2P49005 469 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 EPHB3P54753 998 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 VBP1P61758 197 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 ERVK-9P63128 1117 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 ZNF655Q8N720 491 aaPredicted RBP17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 STAG3L4Q8TBR4 150 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 PLK1P53350 603 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 PDK4Q16654 411 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 AGMOQ6ZNB7 445 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 DAW1Q8N136 415 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 TDRD1Q9BXT4 1180 aaKnown RBP17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 HOXA2O43364 376 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 FGFR1P11362 822 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 FAAP100Q0VG06 881 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 CRY1Q16526 586 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 GCNT7Q6ZNI0 430 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 PIGNO95427 931 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 DHFRP00374 187 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 ABHD2P08910 425 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 MAPKAPK3Q16644 382 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 CBWD6Q4V339 395 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 TTMPQ5BVD1 217 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 ETNPPLQ8TBG4 499 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 SLC5A5Q92911 643 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 MTMR8Q96EF0 704 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 DNPEPQ9ULA0 475 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 PPP2R3BQ9Y5P8 575 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 SDC2P34741 201 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 FNBP1LQ5T0N5 605 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 CREG2Q8IUH2 290 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 LPCAT1Q8NF37 534 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 KAT5Q92993 513 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 CRB1P82279 1406 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 CCDC88AQ3V6T2 1871 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 ZSCAN5CA6NGD5 496 aaPredicted RBP17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 CDC40O60508 579 aaKnown RBP eCLIP17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 VIL1P09327 827 aaKnown RBP17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 ACSM2AQ08AH3 577 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 ZIK1Q3SY52 487 aaPredicted RBP17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 ACSM2BQ68CK6 577 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 PGBD2Q6P3X8 592 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 SLCO6A1Q86UG4 719 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 ZSWIM2Q8NEG5 633 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 C1QTNF7Q9BXJ2 289 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 MORF4L1Q9UBU8 362 aa17.05■□□□□ 0.32
SMCHD1-201ENST00000320876 ZNHIT3Q15649 155 aaPredicted RBP17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 FOXR1Q6PIV2 292 aa17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 RDH11Q8TC12 318 aa17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 CLCC1Q96S66 551 aa17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 PCYOX1Q9UHG3 505 aa17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 PGK1P00558 417 aa17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 THPOP40225 353 aa17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 UBAP2LQ14157 1087 aaKnown RBP17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 ZNF268Q14587 947 aaPredicted RBP17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 RRP1BQ14684 758 aaKnown RBP17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 ACMSDQ8TDX5 336 aa17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 ITGB6P18564 788 aa17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 CYP2A13Q16696 494 aa17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 TCAIMQ8N3R3 496 aa17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 GRPEL2Q8TAA5 225 aa17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 YME1L1Q96TA2 773 aa17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 HKDC1Q2TB90 917 aa17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 FAM129BQ96TA1 746 aa17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 TSPAN16Q9UKR8 245 aa17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 OGDHLQ9ULD0 1010 aa17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 PRPF19Q9UMS4 504 aaKnown RBP17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 LTA4HP09960 611 aaKnown RBP17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 AP3S2P59780 193 aa17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 IL18Q14116 193 aa17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 FBXO47Q5MNV8 452 aa17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 TCF12Q99081 682 aa17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 PRKAR2AP13861 404 aaKnown RBP17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 FOSL2P15408 326 aa17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 KCNJ2P63252 427 aa17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 IRAK1BP1Q5VVH5 260 aa17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 CPB2Q96IY4 423 aa17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 LSM3P62310 102 aaKnown RBP17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 DSG4Q86SJ6 1040 aa17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 PSME2Q9UL46 239 aa17.04■□□□□ 0.32
SMCHD1-201ENST00000320876 SNX3O60493 162 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 ACOX1Q15067 660 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 PAGE2Q7Z2X7 111 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 SERPINB11Q96P15 392 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 VPS45Q9NRW7 570 aa17.03■□□□□ 0.32
SMCHD1-201ENST00000320876 KCND1Q9NSA2 647 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms