RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 CNGA3Q16281 694 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 CCNG2Q16589 344 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 TWISTNBQ3B726 338 aaPredicted RBP4.33□□□□□ -1.72
SMCO3-201ENST00000316048 INO80CQ6PI98 192 aaPredicted RBP4.33□□□□□ -1.72
SMCO3-201ENST00000316048 SLC30A9Q6PML9 568 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 RASAL3Q86YV0 1011 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 TMTC2Q8N394 836 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 LCORLQ8N3X6 602 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 ENDOVQ8N8Q3 282 aaKnown RBP4.33□□□□□ -1.72
SMCO3-201ENST00000316048 FAM110DQ8TAY7 271 aaPredicted RBP4.33□□□□□ -1.72
SMCO3-201ENST00000316048 IP6K1Q92551 441 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 CUL5Q93034 780 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 CD180Q99467 661 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 ARL15Q9NXU5 204 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 TBC1D14Q9P2M4 693 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 SUFUQ9UMX1 484 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 CHL1O00533 1208 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 SLC3A2P08195 630 aaKnown RBP4.33□□□□□ -1.72
SMCO3-201ENST00000316048 ACADMP11310 421 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 EDN2P20800 178 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 IDUAP35475 653 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 ZNF84P51523 738 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 MRPS35P82673 323 aaKnown RBP4.33□□□□□ -1.72
SMCO3-201ENST00000316048 KCNB1Q14721 858 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 MED22Q15528 200 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 LY6G5CQ5SRR4 150 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 DENND2CQ68D51 928 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 ANKRD16Q6P6B7 361 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 TMEM88Q6PEY1 159 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 TMEM200AQ86VY9 491 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 ULK2Q8IYT8 1036 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 TERB1Q8NA31 727 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 SRFBP1Q8NEF9 429 aaKnown RBP4.33□□□□□ -1.72
SMCO3-201ENST00000316048 RAB40AQ8WXH6 277 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 CNOT9Q92600 299 aaKnown RBP4.33□□□□□ -1.72
SMCO3-201ENST00000316048 ZNF503Q96F45 646 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 FYTTD1Q96QD9 318 aaKnown RBP4.33□□□□□ -1.72
SMCO3-201ENST00000316048 ZNF347Q96SE7 839 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 THUMPD2Q9BTF0 503 aaKnown RBP4.33□□□□□ -1.72
SMCO3-201ENST00000316048 PEMTQ9UBM1 199 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 HSPB7Q9UBY9 170 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 TSC22D4Q9Y3Q8 395 aa4.33□□□□□ -1.72
SMCO3-201ENST00000316048 HEMK1Q9Y5R4 338 aaPredicted RBP4.33□□□□□ -1.72
SMCO3-201ENST00000316048 EPN1Q9Y6I3 576 aaPredicted RBP4.33□□□□□ -1.72
SMCO3-201ENST00000316048 IGSF1Q8N6C5 1336 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 RTL1A6NKG5 1358 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 PIK3C2AO00443 1686 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 TCRBV7S3A2A0A539 114 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 TEX22C9J3V5 150 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 TMCC2O75069 709 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 SCGB1D1O95968 90 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 MT-CO3P00414 261 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 TNNT1P13805 278 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 HOXD12P35452 270 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 PBX3P40426 434 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 RPS6KA3P51812 740 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 EFNB1P98172 346 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 GOLGA8FQ08AF8 430 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 SLC18A3Q16572 532 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 MTHFSDQ2M296 383 aaKnown RBP4.32□□□□□ -1.72
SMCO3-201ENST00000316048 DCDC5Q6ZRR9 648 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 GALNT7Q86SF2 657 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 ITPRIPQ8IWB1 547 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 ADSSL1Q8N142 457 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 ZNF366Q8N895 744 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 ZCCHC10Q8TBK6 192 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 ADAD1Q96M93 576 aaKnown RBP4.32□□□□□ -1.72
SMCO3-201ENST00000316048 KLHL15Q96M94 604 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 ABHD14AQ9BUJ0 271 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 KRTAP9-2Q9BYQ4 174 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 PDCL3Q9H2J4 239 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 RANBP17Q9H2T7 1088 aaKnown RBP4.32□□□□□ -1.72
SMCO3-201ENST00000316048 TTC12Q9H892 705 aaPredicted RBP4.32□□□□□ -1.72
SMCO3-201ENST00000316048 MMRN2Q9H8L6 949 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 EIF2B3Q9NR50 452 aaKnown RBP4.32□□□□□ -1.72
SMCO3-201ENST00000316048 TMEM248Q9NWD8 314 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 KCND2Q9NZV8 630 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 FOXJ2Q9P0K8 574 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 PCDHGB4Q9UN71 923 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 NWD1Q149M9 1564 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 KDRP35968 1356 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 PEAK1Q9H792 1746 aa4.32□□□□□ -1.72
SMCO3-201ENST00000316048 TCRBV5S1A1TA0A578 114 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.31□□□□□ -1.72
SMCO3-201ENST00000316048 IGHDP01880 384 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 GCP02774 474 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 LAMP2P13473 410 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 AKR1B1P15121 316 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 ANP32AP39687 249 aaKnown RBP4.31□□□□□ -1.72
SMCO3-201ENST00000316048 TBC1D25Q3MII6 688 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 NAA35Q5VZE5 725 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 GJB7Q6PEY0 223 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 TTLL10Q6ZVT0 673 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 MCM10Q7L590 875 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 SPRED1Q7Z699 444 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 RFX6Q8HWS3 928 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 C8orf58Q8NAV2 365 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 SETD9Q8NE22 299 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 LINC00476Q8WZB0 136 aa4.31□□□□□ -1.72
SMCO3-201ENST00000316048 USP6NLQ92738 828 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms