RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 MID1O15344 667 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 FAM153BP0C7A2 387 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 AP3S2P59780 193 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 PFKFB4Q16877 469 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 GRTP1Q5TC63 336 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 TRIM40Q6P9F5 258 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 DET1Q7L5Y6 550 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 ATXN3LQ9H3M9 355 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 SIN3BO75182 1162 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 RPS2P15880 293 aaKnown RBP13.54□□□□□ -0.24
TRIM56-201ENST00000306085 CRABP2P29373 138 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 FMO4P31512 558 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 KAT5Q92993 513 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 CNPPD1Q9BV87 410 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 RUSC1Q9BVN2 902 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 XKR8Q9H6D3 395 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 CORO2BQ9UQ03 480 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 SAMHD1Q9Y3Z3 626 aaKnown RBP13.54□□□□□ -0.24
TRIM56-201ENST00000306085 SNAP91O60641 907 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 NR1I3Q14994 352 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 SPESP1Q6UW49 350 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 ILDR2Q71H61 639 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 SRFBP1Q8NEF9 429 aaKnown RBP13.54□□□□□ -0.24
TRIM56-201ENST00000306085 MTMR12Q9C0I1 747 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 KCNN2Q9H2S1 579 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 GRAPQ13588 217 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 GRAPLQ8TC17 118 aaPredicted RBP13.54□□□□□ -0.24
TRIM56-201ENST00000306085 TESCQ96BS2 214 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 ZNF639Q9UID6 485 aa13.54□□□□□ -0.24
TRIM56-201ENST00000306085 KPNA3O00505 521 aaPredicted RBP13.53□□□□□ -0.24
TRIM56-201ENST00000306085 SERPINF2P08697 491 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 THPOP40225 353 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 MMADHCQ9H3L0 296 aaPredicted RBP13.53□□□□□ -0.24
TRIM56-201ENST00000306085 RGS17Q9UGC6 210 aaPredicted RBP13.53□□□□□ -0.24
TRIM56-201ENST00000306085 LAMC1P11047 1609 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 MYL4P12829 197 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 TAF6P49848 677 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 JAZF1Q86VZ6 243 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 TMEM169Q96HH4 297 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 PCDHGA10Q9Y5H3 936 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 AP2A2O94973 939 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 OR56A5P0C7T3 313 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 ALDH5A1P51649 535 aaPredicted RBP13.53□□□□□ -0.24
TRIM56-201ENST00000306085 CCZ1BP86790 482 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 CCZ1P86791 482 aaPredicted RBP13.53□□□□□ -0.24
TRIM56-201ENST00000306085 IRGCQ6NXR0 463 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 SLC47A1Q96FL8 570 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 ERMAPQ96PL5 475 aaPredicted RBP13.53□□□□□ -0.24
TRIM56-201ENST00000306085 F5H6K3 240 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 TRIM38O00635 465 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 FAM86B2P0C5J1 330 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 TMEM253P0C7T8 217 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 PECAM1P16284 738 aaPredicted RBP13.53□□□□□ -0.24
TRIM56-201ENST00000306085 KCNA5P22460 613 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 IL6STP40189 918 aaPredicted RBP13.53□□□□□ -0.24
TRIM56-201ENST00000306085 KLRC3Q07444 240 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 TAS2R13Q9NYV9 303 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 KIF20BQ96Q89 1820 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 C9IYK1 514 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 CCNDBP1O95273 360 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 FXR1P51114 621 aaKnown RBP eCLIP13.53□□□□□ -0.24
TRIM56-201ENST00000306085 GJA9P57773 515 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 COLGALT1Q8NBJ5 622 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 MAFIPQ8WZ33 124 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 NELL1Q92832 810 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 SPATA5L1Q9BVQ7 753 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 MOXD2PA6NHM9 499 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 NFIAQ12857 509 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 ZCCHC23Q6ZST2 131 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 SMIM5Q71RC9 77 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 ADGRF2Q8IZF7 708 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 ZNF567Q8N184 647 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 MCFD2Q8NI22 146 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 DPF2Q92785 391 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 DNAJC11Q9NVH1 559 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 PSMG1O95456 288 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 HSDL1Q3SXM5 330 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 TRAPPC5Q8IUR0 188 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 APOPT1Q96IL0 206 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 ATG10Q9H0Y0 220 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 KIAA0100Q14667 2235 aaKnown RBP13.53□□□□□ -0.24
TRIM56-201ENST00000306085 GH1P01241 217 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 PNPLA4P41247 253 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 CRY2Q49AN0 593 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 CWF19L1Q69YN2 538 aaKnown RBP13.53□□□□□ -0.24
TRIM56-201ENST00000306085 RERGQ96A58 199 aaPredicted RBP13.53□□□□□ -0.24
TRIM56-201ENST00000306085 ABCA10Q8WWZ4 1543 aa13.53□□□□□ -0.24
TRIM56-201ENST00000306085 A0A0A6YYK5 440 aaPredicted RBP13.52□□□□□ -0.24
TRIM56-201ENST00000306085 ITGA2P17301 1181 aa13.52□□□□□ -0.24
TRIM56-201ENST00000306085 TPH1P17752 444 aa13.52□□□□□ -0.24
TRIM56-201ENST00000306085 XKR3Q5GH77 459 aa13.52□□□□□ -0.24
TRIM56-201ENST00000306085 ZNF366Q8N895 744 aa13.52□□□□□ -0.24
TRIM56-201ENST00000306085 HASPINQ8TF76 798 aa13.52□□□□□ -0.24
TRIM56-201ENST00000306085 SLC25A23Q9BV35 468 aa13.52□□□□□ -0.24
TRIM56-201ENST00000306085 KDM5DQ9BY66 1539 aa13.52□□□□□ -0.24
TRIM56-201ENST00000306085 SCN2BO60939 215 aa13.52□□□□□ -0.24
TRIM56-201ENST00000306085 GYPCP04921 128 aa13.52□□□□□ -0.24
TRIM56-201ENST00000306085 CYP2F1P24903 491 aa13.52□□□□□ -0.24
TRIM56-201ENST00000306085 ACSM2AQ08AH3 577 aa13.52□□□□□ -0.24
TRIM56-201ENST00000306085 CYP2A13Q16696 494 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms