RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 RAD23AP54725 363 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 FAM83EQ2M2I3 478 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 ANO7Q6IWH7 933 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 RAB42Q8N4Z0 105 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 POC5Q8NA72 575 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 PPHLN1Q8NEY8 458 aaKnown RBP11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 ART4Q93070 314 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 TSPAN17Q96FV3 270 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 IMPAD1Q9NX62 359 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 CACNA2D2Q9NY47 1150 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 DNMT3LQ9UJW3 386 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 VPS28Q9UK41 221 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 CROTQ9UKG9 612 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 DNPEPQ9ULA0 475 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 SORCS3Q9UPU3 1222 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 SESN1Q9Y6P5 492 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 TMEM247A6NEH6 219 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 ZNF263O14978 683 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 TNFRSF21O75509 655 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 LDLRP01130 860 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 HDCP19113 662 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 ADIGQ0VDE8 80 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 TRIM32Q13049 653 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 NFYCQ13952 458 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 RETSATQ6NUM9 610 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 PIGWQ7Z7B1 504 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 SLFN11Q7Z7L1 901 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 STK32CQ86UX6 486 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 ALYREFQ86V81 257 aaKnown RBP11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 DRAXINQ8NBI3 349 aaPredicted RBP11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 B3GALNT2Q8NCR0 500 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 PIWIL2Q8TC59 973 aaKnown RBP11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 SIPA1L3O60292 1781 aaPredicted RBP11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 LY75O60449 1722 aa11.52□□□□□ -0.57
NPC1L1-201ENST00000289547 USP17L7P0C7H9 530 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 TGM2P21980 687 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 IFNA8P32881 189 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 BRCC3P46736 316 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 XIAPP98170 497 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 IL17AQ16552 155 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 VSTM1Q6UX27 236 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 C4orf22Q6V702 233 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 SZRD1Q7Z422 152 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 UBASH3BQ8TF42 649 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 SLC35C1Q96A29 364 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 MYLPFQ96A32 169 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 C9orf16Q9BUW7 83 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 APOL5Q9BWW9 433 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 SPATA16Q9BXB7 569 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 PHACTR1Q9C0D0 580 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 PIF1Q9H611 641 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 RERGLQ9H628 205 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 CYP4F12Q9HCS2 524 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 PTTG2Q9NZH5 202 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 RUVBL2Q9Y230 463 aaKnown RBP11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 NCKAP1Q9Y2A7 1128 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 NAV1Q8NEY1 1877 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 UBDO15205 165 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 ASMTLO95671 621 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 HSMCR30P0CW71 290 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 CNTFP26441 200 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 YWHAZP63104 245 aaKnown RBP11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 NDUFA5Q16718 116 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 SPANXN2Q5MJ10 180 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 TIGD7Q6NT04 549 aaPredicted RBP11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 SATL1Q86VE3 508 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 FAM228AQ86W67 206 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 USP33Q8TEY7 942 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 BHMTQ93088 406 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 CLPTM1LQ96KA5 538 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 ZMYM5Q9UJ78 669 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 SLC12A4Q9UP95 1085 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 C5orf60A6NFR6 353 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 SDR42E2A6NKP2 422 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 H2AFYO75367 372 aaKnown RBP11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 NPR3P17342 541 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 TYMPP19971 482 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 PTPN7P35236 360 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 MARCKSL1P49006 195 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 UBAP2LQ14157 1087 aaKnown RBP11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 KRT72Q14CN4 511 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 SPDYAQ5MJ70 313 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 PCDH20Q8N6Y1 951 aaKnown RBP11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 FAR2Q96K12 515 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 RBBP8Q99708 897 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 FRMD8P1Q9BZ68 369 aaPredicted RBP11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 FAM124BQ9H5Z6 455 aaPredicted RBP11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 WDR41Q9HAD4 459 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 SMPD4Q9NXE4 827 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 BTBD3Q9Y2F9 522 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 FAM32AQ9Y421 112 aaKnown RBP11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 DNAJC25-GNG10A0A024R161 153 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 A0A0U1RQF3 1178 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 MICAL2O94851 1124 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 TIMP1P01033 207 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 CCNA2P20248 432 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 CSTF3Q12996 717 aaKnown RBP11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 C16orf46Q6P387 395 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 TRABD2AQ86V40 505 aa11.51□□□□□ -0.57
NPC1L1-201ENST00000289547 CAMK1DQ8IU85 385 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms