RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 HCAR3P49019 387 aa16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 PSEN2P49810 448 aa16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 MS4A2Q01362 244 aa16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 RAB41Q5JT25 222 aa16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 METTL21CQ5VZV1 264 aa16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 RPS27LQ71UM5 84 aaKnown RBP16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 GALNT15Q8N3T1 639 aa16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 RHOJQ9H4E5 214 aa16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 NDFIP2Q9NV92 336 aa16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 FLRT1Q9NZU1 646 aa16.6■□□□□ 0.25
TM9SF1-201ENST00000261789 C9IYK1 514 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 AURKAO14965 403 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 ETS2P15036 469 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 BDNFP23560 247 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 CXCR3P49682 368 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 CSRP3P50461 194 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 GJA9P57773 515 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 CYLC2Q14093 348 aaPredicted RBP16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 PCBP1Q15365 356 aaKnown RBP eCLIP16.59■□□□□ 0.259e-6■■■■■ 29.7
TM9SF1-201ENST00000261789 NAPEPLDQ6IQ20 393 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 SDCCAG8Q86SQ7 713 aaPredicted RBP16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 KYQ8NBH2 561 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 FAM156AQ8NDB6 213 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 KIFC1Q9BW19 673 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 NUDT5Q9UKK9 219 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 TTC3P53804 2025 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 DDHD2O94830 711 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 ARNTP27540 789 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 ALDH1A3P47895 512 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 CRYBB1P53674 252 aaPredicted RBP16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 AIF1P55008 147 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 FOLH1Q04609 750 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 NOMO2Q5JPE7 1267 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 TSTD2Q5T7W7 516 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 CWF19L1Q69YN2 538 aaKnown RBP16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 LRRC8EQ6NSJ5 796 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 PLEKHH3Q7Z736 793 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 SCAMP5Q8TAC9 235 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 HASPINQ8TF76 798 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 STYXQ8WUJ0 223 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 PGAP3Q96FM1 320 aaPredicted RBP16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 FICDQ9BVA6 458 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 STK39Q9UEW8 545 aa16.59■□□□□ 0.25
TM9SF1-201ENST00000261789 TARM1B6A8C7 271 aa16.58■□□□□ 0.25
TM9SF1-201ENST00000261789 MTSS1O43312 755 aa16.58■□□□□ 0.25
TM9SF1-201ENST00000261789 PMPCBO75439 489 aa16.58■□□□□ 0.25
TM9SF1-201ENST00000261789 CABYRO75952 493 aa16.58■□□□□ 0.25
TM9SF1-201ENST00000261789 HNRNPLP14866 589 aaKnown RBP eCLIP16.58■□□□□ 0.25
TM9SF1-201ENST00000261789 CHRNA4P43681 627 aa16.58■□□□□ 0.25
TM9SF1-201ENST00000261789 SLC12A1Q13621 1099 aa16.58■□□□□ 0.25
TM9SF1-201ENST00000261789 CEACAM7Q14002 265 aa16.58■□□□□ 0.25
TM9SF1-201ENST00000261789 FRG1Q14331 258 aaKnown RBP16.58■□□□□ 0.25
TM9SF1-201ENST00000261789 PRPSAP1Q14558 356 aa16.58■□□□□ 0.25
TM9SF1-201ENST00000261789 CNGA3Q16281 694 aa16.58■□□□□ 0.25
TM9SF1-201ENST00000261789 TSNARE1Q96NA8 513 aa16.58■□□□□ 0.25
TM9SF1-201ENST00000261789 NPAS2Q99743 824 aa16.58■□□□□ 0.25
TM9SF1-201ENST00000261789 RAD54BQ9Y620 910 aa16.58■□□□□ 0.25
TM9SF1-201ENST00000261789 MYCNP04198 464 aaPredicted RBP16.58■□□□□ 0.24
TM9SF1-201ENST00000261789 GSTT1P30711 240 aa16.58■□□□□ 0.24
TM9SF1-201ENST00000261789 PPARGP37231 505 aaPredicted RBP16.58■□□□□ 0.24
TM9SF1-201ENST00000261789 PGFP49763 221 aa16.58■□□□□ 0.24
TM9SF1-201ENST00000261789 FLOT2Q14254 428 aa16.58■□□□□ 0.24
TM9SF1-201ENST00000261789 PDK3Q15120 406 aa16.58■□□□□ 0.24
TM9SF1-201ENST00000261789 CNPY1Q3B7I2 92 aa16.58■□□□□ 0.24
TM9SF1-201ENST00000261789 LIN52Q52LA3 116 aa16.58■□□□□ 0.24
TM9SF1-201ENST00000261789 PKN3Q6P5Z2 889 aa16.58■□□□□ 0.24
TM9SF1-201ENST00000261789 RNF135Q8IUD6 432 aa16.58■□□□□ 0.24
TM9SF1-201ENST00000261789 PQLC1Q8N2U9 271 aa16.58■□□□□ 0.24
TM9SF1-201ENST00000261789 MYLPFQ96A32 169 aa16.58■□□□□ 0.24
TM9SF1-201ENST00000261789 GPR78Q96P69 363 aa16.58■□□□□ 0.24
TM9SF1-201ENST00000261789 TBL1YQ9BQ87 522 aa16.58■□□□□ 0.24
TM9SF1-201ENST00000261789 TRIM4Q9C037 500 aa16.58■□□□□ 0.24
TM9SF1-201ENST00000261789 ZCWPW1Q9H0M4 648 aa16.58■□□□□ 0.24
TM9SF1-201ENST00000261789 CDYLQ9Y232 598 aa16.58■□□□□ 0.24
TM9SF1-201ENST00000261789 ACOT9Q9Y305 439 aa16.58■□□□□ 0.24
TM9SF1-201ENST00000261789 FAM95CA0A1B0GW59 222 aa16.57■□□□□ 0.24
TM9SF1-201ENST00000261789 MSI1O43347 362 aaKnown RBP16.57■□□□□ 0.24
TM9SF1-201ENST00000261789 H2AFYO75367 372 aaKnown RBP16.57■□□□□ 0.24
TM9SF1-201ENST00000261789 SLC1A2P43004 574 aa16.57■□□□□ 0.24
TM9SF1-201ENST00000261789 ROR2Q01974 943 aaKnown RBP16.57■□□□□ 0.24
TM9SF1-201ENST00000261789 NSUN2Q08J23 767 aaKnown RBP eCLIP16.57■□□□□ 0.24
TM9SF1-201ENST00000261789 PRKAA1Q13131 559 aa16.57■□□□□ 0.24
TM9SF1-201ENST00000261789 TLR1Q15399 786 aa16.57■□□□□ 0.24
TM9SF1-201ENST00000261789 CCL14Q16627 93 aa16.57■□□□□ 0.24
TM9SF1-201ENST00000261789 ZNF423Q2M1K9 1284 aa16.57■□□□□ 0.24
TM9SF1-201ENST00000261789 PM20D1Q6GTS8 502 aa16.57■□□□□ 0.24
TM9SF1-201ENST00000261789 DENND5AQ6IQ26 1287 aa16.57■□□□□ 0.24
TM9SF1-201ENST00000261789 SNX31Q8N9S9 440 aa16.57■□□□□ 0.24
TM9SF1-201ENST00000261789 ICA1LQ8NDH6 482 aa16.57■□□□□ 0.24
TM9SF1-201ENST00000261789 DQX1Q8TE96 717 aaKnown RBP16.57■□□□□ 0.24
TM9SF1-201ENST00000261789 GTF3C2Q8WUA4 911 aaPredicted RBP16.57■□□□□ 0.24
TM9SF1-201ENST00000261789 TMA16Q96EY4 203 aaKnown RBP16.57■□□□□ 0.24
TM9SF1-201ENST00000261789 CNDP1Q96KN2 507 aa16.57■□□□□ 0.24
TM9SF1-201ENST00000261789 TMEM209Q96SK2 561 aa16.57■□□□□ 0.24
TM9SF1-201ENST00000261789 VAT1Q99536 393 aa16.57■□□□□ 0.24
TM9SF1-201ENST00000261789 VCX3BQ9H321 246 aa16.57■□□□□ 0.24
TM9SF1-201ENST00000261789 DTNAQ9Y4J8 743 aa16.57■□□□□ 0.24
TM9SF1-201ENST00000261789 AK5Q9Y6K8 562 aa16.57■□□□□ 0.24
TM9SF1-201ENST00000261789 MYLKQ15746 1914 aa16.57■□□□□ 0.24
TM9SF1-201ENST00000261789 CTSHP09668 335 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms