RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 VPS52Q8N1B4 723 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 NELL1Q92832 810 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 ERO1AQ96HE7 468 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 PITPNM3Q9BZ71 974 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 NOD2Q9HC29 1040 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 IGSF5Q9NSI5 407 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 PLK2Q9NYY3 685 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 STIM2Q9P246 746 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 RAD51BO15315 384 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 THAP12O43422 761 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 NEBLO76041 1014 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 TGFB1P01137 390 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 BRAFP15056 766 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 KYNUQ16719 465 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 PSAPL1Q6NUJ1 521 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 LINGO4Q6UY18 593 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 HTR3DQ70Z44 454 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 PIM3Q86V86 326 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 TP53I13Q8NBR0 393 aaPredicted RBP5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 TEKT5Q96M29 485 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 CCDC42Q96M95 316 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 EPB41L5Q9HCM4 733 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 GPATCH2Q9NW75 528 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 A6NCN8 305 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 SNNO75324 88 aaPredicted RBP5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 CCDC166P0CW27 439 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 CCNFP41002 786 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 SLC18A2Q05940 514 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 SNX1Q13596 522 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 CLUL1Q15846 466 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 TREML1Q86YW5 311 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 MNS1Q8NEH6 495 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 GLT1D1Q96MS3 346 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 CNPY3Q9BT09 278 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 LGALS13Q9UHV8 139 aa5.75□□□□□ -1.49
TOPBP1-201ENST00000260810 NPIPB15A6NHN6 443 aaPredicted RBP5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 GOLGA8KD6RF30 607 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 GOLGA8TH3BQL2 631 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 LDHAP00338 332 aaKnown RBP5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 ABCD1P33897 745 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 ZNF697Q5TEC3 545 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 ASRGL1Q7L266 308 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 DAAM2Q86T65 1068 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 BANPQ8N9N5 519 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 CCDC138Q96M89 665 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 TMBIM4Q9HC24 238 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 UBP1Q9NZI7 540 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 SLC23A2Q9UGH3 650 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 ITM2BQ9Y287 266 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 FRMD4BQ9Y2L6 1034 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 GCM2O75603 506 aaPredicted RBP5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 AP1G2O75843 785 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 FGF3P11487 239 aaPredicted RBP5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 UGT1A6P19224 532 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 UGT1A1P22309 533 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 UGT1A4P22310 534 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 PSMB4P28070 264 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 UGT1A3P35503 534 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 UGT1A5P35504 534 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 PAPOLAP51003 745 aaKnown RBP5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 HYAL2Q12891 473 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 PKN2Q16513 984 aaKnown RBP5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 ZNF423Q2M1K9 1284 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 LRIT3Q3SXY7 679 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 TEDDM1Q5T9Z0 273 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 CWF19L1Q69YN2 538 aaKnown RBP5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 PPFIBP1Q86W92 1011 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 ZNF366Q8N895 744 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 ARL14EPQ8N8R7 260 aaPredicted RBP5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 SIMC1Q8NDZ2 872 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 SREK1Q8WXA9 508 aaKnown RBP5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 TRAPPC9Q96Q05 1148 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 MCCC1Q96RQ3 725 aaPredicted RBP5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 NAPGQ99747 312 aaPredicted RBP5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 ZNF670Q9BS34 389 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 FEM1AQ9BSK4 669 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 PLVAPQ9BX97 442 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 SPNS1Q9H2V7 528 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 FAM124BQ9H5Z6 455 aaPredicted RBP5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 OR12D3Q9UGF7 316 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 CAPN14A8MX76 684 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 PHF2O75151 1096 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 CAPNS1P04632 268 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 CHMP4BP1P59074 171 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 ERMARDQ5T6L9 678 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 PIGWQ7Z7B1 504 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 REM2Q8IYK8 340 aaPredicted RBP5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 CNPY4Q8N129 248 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 PCSK9Q8NBP7 692 aaKnown RBP5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 PLA2G15Q8NCC3 412 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 C9orf72Q96LT7 481 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 NECAB3Q96P71 396 aaPredicted RBP5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 ATP11BQ9Y2G3 1177 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 INPP5FQ9Y2H2 1132 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 ITPR3Q14573 2671 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 GOLGA8SH3BPF8 625 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 PSTPIP1O43586 416 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 DLDP09622 509 aaKnown RBP5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 IFNAR2P48551 515 aa5.74□□□□□ -1.49
TOPBP1-201ENST00000260810 HCAR3P49019 387 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms