RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 KIF26BQ2KJY2 2108 aa10.55□□□□□ -0.72
VPS50-201ENST00000251739 LRP4O75096 1905 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 A0A1W2PQU0 124 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 SIGLEC6O43699 453 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 SDC3O75056 442 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 PRNPP04156 253 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 CYP11B1P15538 503 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 PRLRP16471 622 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 GLDCP23378 1020 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 KRT9P35527 623 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 MTIF2P46199 727 aaKnown RBP10.54□□□□□ -0.72
VPS50-201ENST00000251739 SULT1E1P49888 294 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 BPIFB4P59827 614 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 UBE2HP62256 183 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 KRT83P78385 493 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 TARDBPQ13148 414 aaKnown RBP eCLIP10.54□□□□□ -0.72
VPS50-201ENST00000251739 ZNF211Q13398 564 aaPredicted RBP10.54□□□□□ -0.72
VPS50-201ENST00000251739 STAT4Q14765 748 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 NR6A1Q15406 480 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 CAMK4Q16566 473 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 C6orf118Q5T5N4 469 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 ACBD5Q5T8D3 534 aaPredicted RBP10.54□□□□□ -0.72
VPS50-201ENST00000251739 ZNF783Q6ZMS7 281 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 GCNT7Q6ZNI0 430 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 ABI3BPQ7Z7G0 1075 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 SLC22A18ASQ8N1D0 253 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 DCBLD1Q8N8Z6 715 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 TMEM35BQ8NCS4 154 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 OR4C6Q8NH72 309 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 SNIP1Q8TAD8 396 aaKnown RBP10.54□□□□□ -0.72
VPS50-201ENST00000251739 LRIG1Q96JA1 1093 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 HDAC8Q9BY41 377 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 NDST4Q9H3R1 872 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 WDCPQ9H6R7 721 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 KLHL11Q9NVR0 708 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 TMEM51Q9NW97 253 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 MPP6Q9NZW5 540 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 TMEM59LQ9UK28 342 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 ZFR2Q9UPR6 939 aaKnown RBP10.54□□□□□ -0.72
VPS50-201ENST00000251739 NEU3Q9UQ49 428 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 PAXBP1Q9Y5B6 917 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 FHOD1Q9Y613 1164 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 AHCTF1Q8WYP5 2266 aa10.54□□□□□ -0.72
VPS50-201ENST00000251739 PIEZO2Q9H5I5 2752 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 LY6G6EA0A0G2JKS1 128 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 CXorf51AA0A1B0GTR3 108 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 ILVBLA1L0T0 632 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 KPNA3O00505 521 aaPredicted RBP10.53□□□□□ -0.72
VPS50-201ENST00000251739 LZTS3O60299 673 aaPredicted RBP10.53□□□□□ -0.72
VPS50-201ENST00000251739 PIAS2O75928 621 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 ENDOD1O94919 500 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 LSM8O95777 96 aaKnown RBP10.53□□□□□ -0.72
VPS50-201ENST00000251739 CD160O95971 181 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 F9P00740 461 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 THEGLP0DJG4 465 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 JUPP14923 745 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 ZNF18P17022 549 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 HNRNPA2B1P22626 353 aaKnown RBP10.53□□□□□ -0.72
VPS50-201ENST00000251739 DGKAP23743 735 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 EIF2S3P41091 472 aaKnown RBP10.53□□□□□ -0.72
VPS50-201ENST00000251739 ABCG1P45844 678 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 SERPINH1P50454 418 aaKnown RBP10.53□□□□□ -0.72
VPS50-201ENST00000251739 NOMO3P69849 1222 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 INSM1Q01101 510 aaPredicted RBP10.53□□□□□ -0.72
VPS50-201ENST00000251739 DEUP1Q05D60 604 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 KCNMA1Q12791 1236 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 DRAP1Q14919 205 aaPredicted RBP10.53□□□□□ -0.72
VPS50-201ENST00000251739 FAM102AQ5T9C2 384 aaPredicted RBP10.53□□□□□ -0.72
VPS50-201ENST00000251739 MANEALQ5VSG8 457 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 KLHDC7AQ5VTJ3 777 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 SEL1L3Q68CR1 1132 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 LINGO4Q6UY18 593 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 DPY19L3Q6ZPD9 716 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 ERN2Q76MJ5 926 aaKnown RBP10.53□□□□□ -0.72
VPS50-201ENST00000251739 ARCQ7LC44 396 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 TFAP2DQ7Z6R9 452 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 NOP9Q86U38 636 aaKnown RBP10.53□□□□□ -0.72
VPS50-201ENST00000251739 ATP11CQ8NB49 1132 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 OR13H1Q8NG92 308 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 OR7D4Q8NG98 312 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 EPS8L1Q8TE68 723 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 C18orf8Q96DM3 657 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 IFT43Q96FT9 208 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 KLHDC7BQ96G42 594 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 CCDC114Q96M63 670 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 HAPLN3Q96S86 360 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 CEP44Q9C0F1 390 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 SYNCQ9H7C4 482 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 CAAP1Q9H8G2 361 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 UCKL1Q9NWZ5 548 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 U3KQA8 63 aa10.53□□□□□ -0.72
VPS50-201ENST00000251739 F8VZ95 297 aa10.52□□□□□ -0.73
VPS50-201ENST00000251739 SLC31A1O15431 190 aa10.52□□□□□ -0.73
VPS50-201ENST00000251739 BNIP3LO60238 219 aa10.52□□□□□ -0.73
VPS50-201ENST00000251739 LEFTY1O75610 366 aa10.52□□□□□ -0.73
VPS50-201ENST00000251739 ITGB7P26010 798 aa10.52□□□□□ -0.73
VPS50-201ENST00000251739 ITPKBP27987 946 aa10.52□□□□□ -0.73
VPS50-201ENST00000251739 ERCC5P28715 1186 aaPredicted RBP10.52□□□□□ -0.73
VPS50-201ENST00000251739 RNASE9P60153 205 aaKnown RBP10.52□□□□□ -0.73
VPS50-201ENST00000251739 ARF5P84085 180 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms