RNA–Protein interactions for RNA: ENST00000239690.8

NUDCD1-201, Transcript of NudC domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD1, Length 4,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD1-201ENST00000239690 FAM136AQ96C01 138 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 PRR11Q96HE9 360 aaPredicted RBP9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 OMDQ99983 421 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 NDFIP2Q9NV92 336 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 DDIT4Q9NX09 232 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 DUX4Q9UBX2 424 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 TRHDEQ9UKU6 1024 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 A0A087X1B8 175 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 BBIP1A8MTZ0 92 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 DNAJA2O60884 412 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 PDE9AO76083 593 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 KRT6AP02538 564 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 KRT6BP04259 564 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 HNRNPLP14866 589 aaKnown RBP eCLIP9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 NR4A1P22736 598 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 CAPGP40121 348 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 SULT2A1Q06520 285 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 FSTL1Q12841 308 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 TRAP1Q12931 704 aaKnown RBP9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 CCDC142Q17RM4 750 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 CACHD1Q5VU97 1274 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 ZPBP2Q6X784 338 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 KRT73Q86Y46 540 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 SPPL2CQ8IUH8 684 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 MKL1Q969V6 931 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 PHF21AQ96BD5 680 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 PDCD2LQ9BRP1 358 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 SENP6Q9GZR1 1112 aaPredicted RBP9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 CDHR5Q9HBB8 845 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 DDX4Q9NQI0 724 aaKnown RBP9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 HOXC10Q9NYD6 342 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 MAP3K20Q9NYL2 800 aaKnown RBP9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 SIRPGQ9P1W8 387 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 RAPGEFL1Q9UHV5 662 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 TMX2Q9Y320 296 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 COQ4Q9Y3A0 265 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 CSADQ9Y600 493 aa9.65□□□□□ -0.86
NUDCD1-201ENST00000239690 EFCAB10A6NFE3 127 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 GAS2O43903 313 aaKnown RBP9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 FAM189A1O60320 539 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 IVDP26440 423 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 BCAT1P54687 386 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 COPZ1P61923 177 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 NR6A1Q15406 480 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 TRMT10BQ6PF06 316 aaKnown RBP9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 GADL1Q6ZQY3 521 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 ZNF420Q8TAQ5 688 aaPredicted RBP9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 FBXO30Q8TB52 745 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 ADAM32Q8TC27 787 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 ASB9Q96DX5 294 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 MASTLQ96GX5 879 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 MRPL57Q9BQC6 102 aaKnown RBP9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 FICDQ9BVA6 458 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 LEF1Q9UJU2 399 aaPredicted RBP9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 SESN1Q9Y6P5 492 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 DDTLA6NHG4 134 aaPredicted RBP9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 RGL2O15211 777 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 PMM2O15305 246 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 SYNCRIPO60506 623 aaKnown RBP9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 GPIP06744 558 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 SUPT20HL2P0C7V6 817 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 CDK4P11802 303 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 IL1R1P14778 569 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 MAGP20916 626 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 ATP6V1E1P36543 226 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 STT3AP46977 705 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 ECT2LQ008S8 904 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 SLC6A3Q01959 620 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 SUPT20HL1Q3ZLR7 823 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 ANKS6Q68DC2 871 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 ZDHHC17Q8IUH5 632 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 PHTF2Q8N3S3 785 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 PACRGLQ8N7B6 248 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 FNDC5Q8NAU1 212 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 ISOC1Q96CN7 298 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 CCDC106Q9BWC9 280 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 CAB39LQ9H9S4 337 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 SYTL2Q9HCH5 934 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 TMEM161AQ9NX61 479 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 PRELID1Q9Y255 219 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 MYOCOSA0A1B0GUC4 107 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 ADRA2BP18089 450 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 IFNA8P32881 189 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 KRT20P35900 424 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 CD97P48960 835 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 SERPINH1P50454 418 aaKnown RBP9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 NDST1P52848 882 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 BNC1Q01954 994 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 RAD51Q06609 339 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 CCNIQ14094 377 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 GRIK5Q16478 980 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 RFX4Q33E94 735 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 PTPN20Q4JDL3 420 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 SGO1Q5FBB7 561 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 SAPCD2Q86UD0 394 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 SCUBE3Q8IX30 993 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 OR5B17Q8NGF7 314 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 SYTL5Q8TDW5 730 aaPredicted RBP9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 TEX12Q9BXU0 123 aa9.64□□□□□ -0.87
NUDCD1-201ENST00000239690 PRKD2Q9BZL6 878 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms