RNA–Protein interactions for RNA: ENST00000225696.8

NUP88-201, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-201ENST00000225696 GPR22Q99680 433 aa12.58□□□□□ -0.4
NUP88-201ENST00000225696 CIB1Q99828 191 aa12.58□□□□□ -0.4
NUP88-201ENST00000225696 OSBPL2Q9H1P3 480 aa12.58□□□□□ -0.4
NUP88-201ENST00000225696 GOLGA2P5Q9HBQ8 144 aa12.58□□□□□ -0.4
NUP88-201ENST00000225696 OLAHQ9NV23 265 aa12.58□□□□□ -0.4
NUP88-201ENST00000225696 SETD4Q9NVD3 440 aa12.58□□□□□ -0.4
NUP88-201ENST00000225696 PRORSD1PA6NEY8 169 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 BTBD19C9JJ37 291 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 TMX2-CTNND1H3BSU7 103 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 FBP2O00757 339 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 SDHDO14521 159 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 TADA2AO75478 443 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 CKMT2P17540 419 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 AKAP5P24588 427 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 HOXA11P31270 313 aaPredicted RBP12.57□□□□□ -0.4
NUP88-201ENST00000225696 GNL1P36915 607 aaPredicted RBP12.57□□□□□ -0.4
NUP88-201ENST00000225696 STT3AP46977 705 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 PSME3P61289 254 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 VGLL4Q14135 290 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 IKBKEQ14164 716 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 DGKDQ16760 1214 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 PITRM1Q5JRX3 1037 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 SH2D4BQ5SQS7 431 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 HMBOX1Q6NT76 420 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 OTOP3Q7RTS5 596 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 NT5DC4Q86YG4 428 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 SULF1Q8IWU6 871 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 ITFG2Q969R8 447 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 HSPBAP1Q96EW2 488 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 SLC39A3Q9BRY0 314 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 IL22Q9GZX6 179 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 CAAP1Q9H8G2 361 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 ERAP1Q9NZ08 941 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 TLK1Q9UKI8 766 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 AP4S1Q9Y587 144 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 SNX13Q9Y5W8 968 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 TIMM44O43615 452 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 CABYRO75952 493 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 FYNP06241 537 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 KCNA5P22460 613 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 GJA9P57773 515 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 CTBSQ01459 385 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 ZBTB6Q15916 424 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 ANO4Q32M45 955 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 SH3D19Q5HYK7 790 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 C9orf57Q5W0N0 161 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 LAYNQ6UX15 382 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 TTC39CQ8N584 583 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 TXNDC5Q8NBS9 432 aaKnown RBP12.57□□□□□ -0.4
NUP88-201ENST00000225696 CATSPER1Q8NEC5 780 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 ABTB1Q969K4 478 aaPredicted RBP12.57□□□□□ -0.4
NUP88-201ENST00000225696 NT5C3BQ969T7 300 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 ZNF419Q96HQ0 510 aaPredicted RBP12.57□□□□□ -0.4
NUP88-201ENST00000225696 ZNF597Q96LX8 424 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 NPY6RQ99463 290 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 CCT7Q99832 543 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 NOL11Q9H8H0 719 aaKnown RBP12.57□□□□□ -0.4
NUP88-201ENST00000225696 CDHR5Q9HBB8 845 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 RCOR3Q9P2K3 495 aaPredicted RBP12.57□□□□□ -0.4
NUP88-201ENST00000225696 SFMBT1Q9UHJ3 866 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 CROCCQ5TZA2 2017 aa12.57□□□□□ -0.4
NUP88-201ENST00000225696 ARHGEF37A1IGU5 675 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 NRP1O14786 923 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 FOXD2O60548 495 aaPredicted RBP12.56□□□□□ -0.4
NUP88-201ENST00000225696 DDHD2O94830 711 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 MT-CO1P00395 513 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 LGALS2P05162 132 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 GNAO1P09471 354 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 GRM5P41594 1212 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 ADARP55265 1226 aaKnown RBP12.56□□□□□ -0.4
NUP88-201ENST00000225696 SH3BGRP55822 239 aaPredicted RBP12.56□□□□□ -0.4
NUP88-201ENST00000225696 C1QTNF8P60827 252 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 PPIDQ08752 370 aaKnown RBP12.56□□□□□ -0.4
NUP88-201ENST00000225696 PDAP1Q13442 181 aaKnown RBP12.56□□□□□ -0.4
NUP88-201ENST00000225696 TRIM25Q14258 630 aaKnown RBP12.56□□□□□ -0.4
NUP88-201ENST00000225696 LRRC8EQ6NSJ5 796 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 MAMDC4Q6UXC1 1216 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 GADL1Q6ZQY3 521 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 BNIPLQ7Z465 357 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 CARM1Q86X55 608 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 IFNLR1Q8IU57 520 aaPredicted RBP12.56□□□□□ -0.4
NUP88-201ENST00000225696 OR9I1Q8NGQ6 314 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 SPATA22Q8NHS9 363 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 LPGAT1Q92604 370 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 ASB9Q96DX5 294 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 NXF3Q9H4D5 531 aaKnown RBP12.56□□□□□ -0.4
NUP88-201ENST00000225696 TRPC7Q9HCX4 862 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 KLK14Q9P0G3 267 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 TRIM38O00635 465 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 AURKAO14965 403 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 H2AFYO75367 372 aaKnown RBP12.56□□□□□ -0.4
NUP88-201ENST00000225696 USP2O75604 605 aaPredicted RBP12.56□□□□□ -0.4
NUP88-201ENST00000225696 SLC26A2P50443 739 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 CSE1LP55060 971 aaKnown RBP12.56□□□□□ -0.4
NUP88-201ENST00000225696 YBX1P67809 324 aaKnown RBP12.56□□□□□ -0.4
NUP88-201ENST00000225696 COG7P83436 770 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 RFTN1Q14699 578 aaPredicted RBP12.56□□□□□ -0.4
NUP88-201ENST00000225696 HERC3Q15034 1050 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 KLHL35Q6PF15 583 aa12.56□□□□□ -0.4
NUP88-201ENST00000225696 BORAQ6PGQ7 559 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms