RNA–Protein interactions for RNA: ENST00000220429.12

GABPB1-201, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-201ENST00000220429 PLXNB2O15031 1838 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 SNX2O60749 519 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 CLPXO76031 633 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 LSM8O95777 96 aaKnown RBP13.83□□□□□ -0.2
GABPB1-201ENST00000220429 IDUAP35475 653 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 PRKCQQ04759 706 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 ARHGAP1Q07960 439 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 DNASE1L3Q13609 305 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 KLHL38Q2WGJ6 581 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 ATP13A4Q4VNC1 1196 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 ARMCX2Q7L311 632 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 ZC3H7AQ8IWR0 971 aaKnown RBP13.83□□□□□ -0.2
GABPB1-201ENST00000220429 LILRA2Q8N149 483 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 SIX6OS1Q8N1H7 587 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 DEPDC4Q8N2C3 294 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 DTX3Q8N9I9 347 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 TRIB2Q92519 343 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 TMEM79Q9BSE2 394 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 NOL6Q9H6R4 1146 aaKnown RBP13.83□□□□□ -0.2
GABPB1-201ENST00000220429 IFT122Q9HBG6 1241 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 SCUBE2Q9NQ36 999 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 KLHL11Q9NVR0 708 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 IP6K2Q9UHH9 426 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 CNOT11Q9UKZ1 510 aaKnown RBP13.83□□□□□ -0.2
GABPB1-201ENST00000220429 KAT6AQ92794 2004 aa13.83□□□□□ -0.2
GABPB1-201ENST00000220429 CROCCQ5TZA2 2017 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 I3L4J1 428 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 KLF11O14901 512 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 LPXNO60711 386 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 CAPNS1P04632 268 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 CALB1P05937 261 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 KRT3P12035 628 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 COPZ1P61923 177 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 OGDHQ02218 1023 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 ZNF846Q147U1 533 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 LRIT3Q3SXY7 679 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 FAM47CQ5HY64 1035 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 ZFP1Q6P2D0 407 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 IDO2Q6ZQW0 420 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 DENND5BQ6ZUT9 1274 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 USP50Q70EL3 339 aaPredicted RBP13.82□□□□□ -0.2
GABPB1-201ENST00000220429 BTLAQ7Z6A9 289 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 VPS37AQ8NEZ2 397 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 RASSF5Q8WWW0 418 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 KCNK16Q96T55 309 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 SNTG2Q9NY99 539 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 ERAP1Q9NZ08 941 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 ITGA11Q9UKX5 1188 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 TNFSF13BQ9Y275 285 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 TRIP11Q15643 1979 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 C7orf72A4D263 438 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 ASB14A6NK59 587 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 GPR25O00155 361 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 ACOX3O15254 700 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 TNNC2P02585 160 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 INSRRP14616 1297 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 YBX3P16989 372 aaKnown RBP eCLIP13.82□□□□□ -0.21e-6■□□□□ 11.3
GABPB1-201ENST00000220429 ACAT1P24752 427 aaKnown RBP13.82□□□□□ -0.2
GABPB1-201ENST00000220429 PTGS2P35354 604 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 ETV4P43268 484 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 GPD2P43304 727 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 DSTNP60981 165 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 MRPS22P82650 360 aaKnown RBP13.82□□□□□ -0.2
GABPB1-201ENST00000220429 ECT2LQ008S8 904 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 NME3Q13232 169 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 OTOP3Q7RTS5 596 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 ZNF354CQ86Y25 554 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 ASCC1Q8N9N2 400 aaKnown RBP13.82□□□□□ -0.2
GABPB1-201ENST00000220429 TMEM35BQ8NCS4 154 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 SHCBP1Q8NEM2 672 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 TXNDC15Q96J42 360 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 MCEEQ96PE7 176 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 FAM111AQ96PZ2 611 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 OSBPL11Q9BXB4 747 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 NPLQ9BXD5 320 aaPredicted RBP13.82□□□□□ -0.2
GABPB1-201ENST00000220429 NAA50Q9GZZ1 169 aaKnown RBP13.82□□□□□ -0.2
GABPB1-201ENST00000220429 NXF1Q9UBU9 619 aaKnown RBP13.82□□□□□ -0.2
GABPB1-201ENST00000220429 SIX4Q9UIU6 781 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 PCDHGC3Q9UN70 934 aa13.82□□□□□ -0.2
GABPB1-201ENST00000220429 CITO14578 2027 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 NOL3O60936 208 aaKnown RBP13.81□□□□□ -0.2
GABPB1-201ENST00000220429 SPAG6O75602 509 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 BCL10O95999 233 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 KITP10721 976 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 CDH5P33151 784 aaPredicted RBP13.81□□□□□ -0.2
GABPB1-201ENST00000220429 EPHX2P34913 555 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 RAP1GAPP47736 663 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 DPYSQ14117 519 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 NRF1Q16656 503 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 DNAJC24Q6P3W2 148 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 ZC3H15Q8WU90 426 aaKnown RBP13.81□□□□□ -0.2
GABPB1-201ENST00000220429 MAP6Q96JE9 813 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 PKP2Q99959 881 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 SPON1Q9HCB6 807 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 SDR42E2A6NKP2 422 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 CLDN25C9JDP6 229 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 F8VP50 259 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 PI4K2BG5E9Z4 385 aa13.81□□□□□ -0.2
GABPB1-201ENST00000220429 POLR1CO15160 346 aaPredicted RBP13.81□□□□□ -0.2
GABPB1-201ENST00000220429 GCATO75600 419 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms