RNA–Protein interactions for RNA: ENSMUST00000106865.7

Ccdc47-202, Transcript of Coiled-coil domain-containing protein 47, mousemouse

TSL 1 (best) BASIC

Gene Ccdc47, Length 704 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-202ENSMUST00000106865 Slitrk1Q810C1 696 aa7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Znf771Q8BJ90 317 aa7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 H2afy2Q8CCK0 372 aaKnown RBP7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 MafaQ8CF90 359 aa7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 LipmQ8K2A6 422 aa7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Il36gQ8R460 164 aa7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Cpa5Q8R4H4 436 aa7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Dnajc9Q91WN1 259 aaKnown RBP7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 NcaldQ91X97 193 aa7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Lims2Q91XD2 341 aa7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Nek8Q91ZR4 698 aa7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 SncbQ91ZZ3 133 aa7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Rin1Q921Q7 763 aa7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 4930550L24RikQ99PA7 320 aa7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Pkp2Q9CQ73 795 aaKnown RBP7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Slc25a11Q9CR62 314 aaKnown RBP7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Emc2Q9CRD2 297 aa7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Snx10Q9CWT3 201 aa7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Setd6Q9CWY3 473 aa7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Mdm1Q9D067 708 aa7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Ccdc124Q9D8X2 217 aaKnown RBP7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 1700016D06RikQ9DAA5 166 aa7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Cst12Q9DAN8 128 aa7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Cpne8Q9DC53 577 aa7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Tsc1Q9EP53 1161 aa7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 DpysQ9EQF5 519 aa7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Htra2Q9JIY5 458 aa7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 PodxlQ9R0M4 503 aa7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Rfwd2Q9R1A8 733 aaKnown RBP7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Znf394Q9Z1D9 521 aa7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 CcniQ9Z2V9 377 aa7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Ank3G5E8K5 1961 aa7.35□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Tmem131O70472 1877 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Tldc2A2ACG1 198 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Fam209A2APA5 170 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Vwa5b1A9Z1V5 1215 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Tnfrsf25B1AWN9 411 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Gm9920D3YVZ2 140 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Lonrf1D3YY23 762 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Gm11397F6V5V4 377 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 F6Y6L6 278 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Bcat2O35855 393 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Ppargc1aO70343 797 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Per3O70361 1113 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Casp8O89110 480 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 CalrP14211 416 aaKnown RBP7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Rab20P35295 233 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Bmpr1aP36895 532 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 PhbP67778 272 aaKnown RBP7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Tmprss15P97435 1069 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 VegfaQ00731 214 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Pde1bQ01065 535 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Mc1rQ01727 315 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Znf112Q0VAW7 879 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Ccndbp1Q3TVC7 356 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Hhla1Q3TYV2 514 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Mylk3Q3UIZ8 795 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Upf3bQ3ULL6 472 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Esrp1Q3US41 680 aaKnown RBP7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Dzip1lQ499E4 774 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Klra7Q60654 280 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 XiapQ60989 496 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Rab34Q64008 259 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Jade3Q6IE82 823 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 ToporsQ80Z37 1033 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Fut11Q8BHC9 489 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Znf879Q8BI99 563 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Map1sQ8C052 973 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Taf2Q8C176 1104 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Tmem145Q8C4U2 746 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 N4bp3Q8C7U1 537 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Vwc2Q8C8N3 324 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Ccdc159Q8C963 411 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Gm5591Q8CDK1 855 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Gpc3Q8CFZ4 579 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 OgtQ8CGY8 1046 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 OlahQ8R197 265 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Lars2Q8VDC0 902 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Hdhd5Q91WM2 419 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Pip4k2cQ91XU3 421 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Rnf112Q96DY5 654 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Dpp3Q99KK7 738 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Trem2Q99NH8 227 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Chchd3Q9CRB9 227 aaKnown RBP7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Zfp773Q9CZ29 471 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Med7Q9CZB6 233 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 IqcdQ9D3V1 458 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Hsf2bpQ9D4G2 338 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Mrpl2Q9D773 306 aaKnown RBP7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Q9DA42 136 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Zfyve19Q9DAZ9 389 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 C1qtnf1Q9QXP7 281 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Tnfrsf10bQ9QZM4 381 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Ggps1Q9WTN0 300 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Anapc7Q9WVM3 565 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Gadd45gQ9Z111 159 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Cd320Q9Z1P5 260 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Pck1Q9Z2V4 622 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 CntrlA2AL36 2334 aa7.34□□□□□ -1.23
Ccdc47-202ENSMUST00000106865 Plxna1P70206 1894 aa7.34□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms