RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Kiaa1522A2A7S8 1013 aa23.05■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Aldoart1A6ZI46 419 aa23.05■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Gm6588E9Q3K0 461 aa23.05■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Banf1O54962 89 aa23.05■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Ptger3P30557 365 aa23.05■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Scg3P47867 471 aa23.05■■□□□ 1.28
Scn1b-201ENSMUST00000098548 CstaP56567 97 aa23.05■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Neurog1P70660 244 aa23.05■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Gm29609Q3UU56 907 aa23.05■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Gpr65Q61038 337 aa23.05■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Dpy19l3Q71B07 716 aa23.05■■□□□ 1.28
Scn1b-201ENSMUST00000098548 NfascQ810U3 1240 aa23.05■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Gtf3c2Q8BL74 907 aa23.05■■□□□ 1.28
Scn1b-201ENSMUST00000098548 B130006D01RikQ8BRH6 153 aa23.05■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Fam204aQ8C6C7 236 aa23.05■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Tmem259Q8CIV2 574 aa23.05■■□□□ 1.28
Scn1b-201ENSMUST00000098548 NelfcdQ922L6 591 aa23.05■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Tssk3Q9D2E1 268 aa23.05■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Adamts20P59511 1906 aa23.04■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Vmn1r176G3UW31 304 aa23.04■■□□□ 1.28
Scn1b-201ENSMUST00000098548 BC024978J3QPC3 361 aa23.04■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Cldn4O35054 210 aa23.04■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Syn1O88935 706 aa23.04■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Sp1O89090 784 aa23.04■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Atxn10P28658 475 aa23.04■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Sash1P59808 1230 aa23.04■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Gpr17Q6NS65 339 aa23.04■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Q6P2K3 674 aa23.04■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Zbtb24Q80X44 710 aa23.04■■□□□ 1.28
Scn1b-201ENSMUST00000098548 RbsnQ80Y56 783 aa23.04■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Xylt1Q811B1 953 aa23.04■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Il17reQ8BH06 637 aa23.04■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Znf76Q8BMU0 568 aa23.04■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Klhl38Q8BSF5 581 aa23.04■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Ano4Q8C5H1 955 aa23.04■■□□□ 1.28
Scn1b-201ENSMUST00000098548 FtcdQ91XD4 541 aa23.04■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Vangl2Q91ZD4 521 aa23.04■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Tas1r2Q925I4 843 aa23.04■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Ebag9Q9D0V7 213 aa23.04■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Efcab9Q9DAM2 216 aa23.04■■□□□ 1.28
Scn1b-201ENSMUST00000098548 EtfbQ9DCW4 255 aaKnown RBP23.04■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Prmt1Q9JIF0 371 aa23.04■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Eml5Q8BQM8 1977 aa23.03■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Itga9B8JK39 1036 aa23.03■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Mybpc3O70468 1270 aaKnown RBP23.03■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Trim43bP86448 445 aa23.03■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Kctd16Q5DTY9 427 aa23.03■■□□□ 1.28
Scn1b-201ENSMUST00000098548 HiraQ61666 1015 aa23.03■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Krt77Q6IFZ6 572 aa23.03■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Q6PAC4 1279 aa23.03■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Chsy1Q6ZQ11 800 aa23.03■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Olfr20Q7TRX9 314 aa23.03■■□□□ 1.28
Scn1b-201ENSMUST00000098548 SnphQ80U23 495 aa23.03■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Lrrc19Q8BZT5 364 aa23.03■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Tmem82Q8R115 356 aa23.03■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Lrrc3bQ8VCH9 259 aa23.03■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Asz1Q8VD46 475 aa23.03■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Pcdhb11Q91UZ8 797 aa23.03■■□□□ 1.28
Scn1b-201ENSMUST00000098548 TfQ921I1 697 aa23.03■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Rap1gds1E9Q912 607 aa23.02■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Spin2fJ3QPU0 254 aa23.02■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Gm14496K7N5U4 849 aa23.02■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Diaph2O70566 1098 aa23.02■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Cyp8b1O88962 500 aa23.02■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Cyp21P03940 487 aa23.02■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Ap2a1P17426 977 aaKnown RBP23.02■■□□□ 1.28
Scn1b-201ENSMUST00000098548 TubP50586 505 aa23.02■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Ntsr2P70310 416 aa23.02■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Ccdc110Q3V125 848 aa23.02■■□□□ 1.28
Scn1b-201ENSMUST00000098548 HecaQ3V1N5 544 aaKnown RBP23.02■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Creb3Q61817 404 aa23.02■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Spa17Q62252 149 aa23.02■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Bfsp2Q6NVD9 416 aa23.02■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Dcun1d2Q8BZJ7 259 aa23.02■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Vps37bQ8R0J7 285 aa23.02■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Olfr478Q8VG04 314 aa23.02■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Ppp1r16aQ923M0 524 aa23.02■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Ubox5Q925F4 539 aa23.02■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Rmi1Q9D4G9 616 aa23.02■■□□□ 1.28
Scn1b-201ENSMUST00000098548 AuhQ9JLZ3 314 aa23.02■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Elf4Q9Z2U4 655 aa23.02■■□□□ 1.28
Scn1b-201ENSMUST00000098548 Cep85lA0A1W2P884 806 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Gm10718D3Z1I7 227 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Fam170bE9PXT9 378 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Dcpp2E9PYC2 171 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Morc3F7BJB9 942 aaKnown RBP23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Dcpp1L7N1X9 171 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Ndst2P52850 883 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Eif4ebp2P70445 120 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Gjb5Q02739 271 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Inpp4bQ6P1Y8 924 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Prr33Q8C494 260 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Gpr153Q8K0Z9 631 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Brd8Q8R3B7 951 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Acsf2Q8VCW8 615 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Mccc1Q99MR8 717 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 KynuQ9CXF0 464 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 4930578G10RikQ9D4Q4 153 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Ovca2Q9D7E3 225 aa23.01■■□□□ 1.27
Scn1b-201ENSMUST00000098548 Pebp4Q9D9G2 242 aa23.01■■□□□ 1.27
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms