RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Gpbp1l1Q6NZP2 473 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Rad54bQ6PFE3 886 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Olfr20Q7TRX9 314 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Zbtb8bQ8CII0 484 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Chst15Q91XQ5 561 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Lrrc4Q99PH1 652 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Snrpb2Q9CQI7 225 aaKnown RBP10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Rex1bdQ9CYZ6 169 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Tmem68Q9D850 329 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Nif3l1Q9EQ80 376 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 PignQ9R1S3 931 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Gria3Q9Z2W9 888 aa10.43□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Zyg11aA2BFL2 627 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Grip2G3XA20 1042 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ptpn1P35821 432 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 S100gP97816 79 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Kctd19Q562E2 927 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Clptm1lQ8BXA5 539 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Crtc3Q91X84 619 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 TfQ921I1 697 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Cyp3a44Q9EQW4 504 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Rpl9-ps6A0A140T8T4 192 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 PdynO35417 248 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Rpl9P51410 192 aaKnown RBP10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Bcl2l1Q64373 233 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Orai3Q6P8G8 290 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Prdm4Q80V63 803 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Mfsd14bQ8CIA9 507 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Mcrs1Q99L90 462 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Borcs5Q9D920 195 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Tssc4Q9JHE7 317 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Atp6v1c1Q9Z1G3 382 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Sf3b1Q99NB9 1304 aaKnown RBP10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Armt1A6H630 439 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 SmgcF6VRN1 385 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Dusp8O09112 663 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Reps1O54916 795 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Serpina3cP29621 417 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 DsppP97399 934 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Lrrc8bQ5DU41 803 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Adora2aQ60613 410 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Tecpr1Q80VP0 1166 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Fam126bQ8C729 530 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Pphln1Q8K2H1 381 aaKnown RBP10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Gins4Q99LZ3 223 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 DpysQ9EQF5 519 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 B4galt4Q9JJ04 344 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Cntnap5aQ0V8T9 1304 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Arrdc4A0A0B4J1F4 415 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Gm8267E9Q207 261 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Serpine3E9Q6A2 401 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 LtfP08071 707 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Cyp2b9P12790 491 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Polr2lP62876 67 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Cyp2c65Q148B1 490 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Nr2e1Q64104 385 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Fam149b1Q6NSV7 578 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Slc39a14Q75N73 489 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Fam163bQ8BUM6 167 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Slc22a19Q8VCA0 551 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Senp2Q91ZX6 588 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Zfp64Q99KE8 643 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Habp4Q9JKS5 411 aaKnown RBP10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Cdc42ep5Q9Z0X0 150 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Lactbl1S4R213 581 aa10.42□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 NuggcD3YWJ0 796 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Kctd18E0CZ26 429 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Adgrf2E9Q4J9 644 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Slc9a3G3X939 829 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Calhm3J3QMI4 347 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Top6blJ3QMY9 579 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Pde8aO88502 823 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Rrm2P11157 390 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Cbx2P30658 519 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Rpl5P47962 297 aaKnown RBP10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 HpcaP84075 193 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Dab1P97318 588 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Zc3hav1Q3UPF5 946 aaKnown RBP10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Akr1clQ3UXL1 322 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Ifit3Q64345 403 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 VclQ64727 1066 aaKnown RBP10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Hmgb4Q6P8W9 181 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Plekha8Q80W71 519 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Mapre2Q8R001 326 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Impg1Q8R1W8 798 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 GcshQ91WK5 170 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Hey2Q9QUS4 339 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 AurkcO88445 282 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Aldh1a1P24549 501 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Rab21P35282 222 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Pcyt1aP49586 367 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Psme3P61290 254 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Rad51Q08297 339 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Fbln1Q08879 705 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Lrrc47Q505F5 581 aaKnown RBP10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Trpc1Q61056 793 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Nfe2l1Q61985 741 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Vmn2r26Q6TAC4 855 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Sgo2Q7TSY8 1164 aa10.41□□□□□ -0.74
Ccdc40-201ENSMUST00000035935 Fbxw8Q8BIA4 598 aa10.41□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 54.4 ms