RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Smarcal1Q8BJL0 910 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 MafaQ8CF90 359 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Olfr1302Q8VGE9 315 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Idh3bQ91VA7 384 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Aim2Q91VJ1 354 aaKnown RBP16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Traf7Q922B6 594 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Gemin2Q9CQQ4 269 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Tmem68Q9D850 329 aa16.79■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 AdgbG3UZ78 1657 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Nedd8P29595 81 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 MylpfP97457 169 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Olfr20Q7TRX9 314 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Adamts2Q8C9W3 1213 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Ccdc28bQ8CEG5 200 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 RorbQ8R1B8 470 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Lars2Q8VDC0 902 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Setd7Q8VHL1 366 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Txnrd3Q99MD6 652 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Q9CPS8 106 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 AenQ9CZI9 336 aaKnown RBP16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Clvs1Q9D4C9 354 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Ap3m1Q9JKC8 418 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 H2-AaP01910 256 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Cyp2b9P12790 491 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Cbx2P30658 519 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Rab10P61027 200 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Smad5P97454 465 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Sh2d1b2Q45HK4 132 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Slc39a13Q8BZH0 361 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Vmn1r206Q8R277 312 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Mrgpra2Q91WW4 305 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Ecrg4Q99LS0 148 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Sppl3Q9CUS9 384 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Olfr703Q9EPF5 319 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Serpini2Q9JK88 405 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Gmeb1Q9JL60 562 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Trpc4apQ9JLV2 797 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Mtx3D3YTP3 312 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Kcnt2D3Z649 1135 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Cyp2b19O55071 492 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Kcnn4O89109 425 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Pax3P24610 479 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Phactr4Q501J7 694 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Chst10Q6PGK7 356 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Krr1Q8BGA5 380 aaKnown RBP16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Qsox1Q8BND5 748 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Rap2cQ8BU31 183 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Syt15Q8C6N3 418 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Zfp57Q8C6P8 421 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Chchd6Q91VN4 273 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Pgm3Q9CYR6 542 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Kctd4Q9D7X1 259 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Borcs5Q9D920 195 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Arap3Q8R5G7 1538 aa16.78■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Fam171a2A2A699 822 aa16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Vmn2r31L7N1Z4 861 aa16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Hs3st1O35310 311 aa16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Pabpc1P29341 636 aaKnown RBP16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Adcy6Q01341 1165 aa16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 PhgdhQ61753 533 aaKnown RBP16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Camk1dQ8BW96 385 aa16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Trpv3Q8K424 791 aa16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Snrpb2Q9CQI7 225 aaKnown RBP16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Efcab9Q9DAM2 216 aa16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Scgb2b21A0A087WQA9 112 aa16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 PurbO35295 324 aaKnown RBP16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Yme1l1O88967 715 aaKnown RBP16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Lamp1P11438 406 aaKnown RBP16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Nlrc4Q3UP24 1024 aa16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Hmgxb4Q80Y32 594 aaKnown RBP16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Ifnl3Q8CGK6 193 aa16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Cybrd1Q925G2 290 aa16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Spg21Q9CQC8 308 aa16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Pak1ip1Q9DCE5 382 aaKnown RBP16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Olfr706Q9EPF8 316 aa16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Abca14E9Q8F8 1683 aa16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Ric1Q69ZJ7 1422 aa16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Zbed5B2RPU8 756 aa16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Tap1P21958 724 aa16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 FynP39688 537 aa16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Larp7Q05CL8 570 aaKnown RBP16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Etaa1Q5SVT3 877 aa16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Dnajc1Q61712 552 aaKnown RBP16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Mef2dQ63943 514 aa16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Larp4bQ6A0A2 741 aaKnown RBP16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Cep78Q6IRU7 790 aa16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 Cables1Q9ESJ1 568 aa16.77■□□□□ 0.28
Ubfd1-201ENSMUST00000033158 4931406B18RikA2RSL7 367 aa16.77■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Ptchd4B9EKX1 904 aa16.77■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Trdmt1O55055 415 aa16.77■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 PdgfrbP05622 1098 aa16.77■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Aldh1a1P24549 501 aa16.77■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Abl2Q4JIM5 1182 aa16.77■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Rrm2bQ6PEE3 351 aa16.77■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Q8BGA7 448 aa16.77■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Orai2Q8BH10 250 aa16.77■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Dus1lQ8C2P3 475 aa16.77■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Mark1Q8VHJ5 795 aa16.77■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 Tex22Q9D9U4 189 aa16.77■□□□□ 0.27
Ubfd1-201ENSMUST00000033158 March8Q9DBD2 286 aa16.77■□□□□ 0.27
Retrieved 100 of 22,080 RNA–protein pairs in 38.8 ms