RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Fam162aQ9D6U8 155 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Map3k14Q9WUL6 942 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Arid3bQ9Z1N7 568 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Map7d3A2AEY4 876 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Aldoart1A6ZI46 419 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Hs3st1O35310 311 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Phkg1P07934 388 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Slc12a1P55014 1095 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Tmem207P86045 143 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Akr1clQ3UXL1 322 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 ScinQ60604 715 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Olfr8Q60892 310 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Pcbp2Q61990 362 aaKnown RBP16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Map2k2Q63932 401 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Clec18aQ7TSQ1 534 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 DseQ8BLI4 958 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 AA792892Q8C6S1 278 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Tp53bp2Q8CG79 1128 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 LipmQ8K2A6 422 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Olfr1352Q8VGX5 309 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Tnfaip8l2Q9D8Y7 184 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Scn10aQ6QIY3 1958 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Klhl18A0A0G2JGN5 579 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Klhl32A2AJX0 620 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Rhox3fA2ANE1 215 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 2310061I04RikB8JJ69 315 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Top3aO70157 1003 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Soat2O88908 525 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Abcb1bP06795 1276 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Asgr1P34927 284 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Brcc3P46737 291 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 McuQ3UMR5 350 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Aldh1a2Q62148 518 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Wee2Q66JT0 555 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Cyp2c54Q6XVG2 490 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Creld1Q91XD7 420 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Cyp3a41aQ9JMA7 504 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 ApipQ9WVQ5 241 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Gria4Q9Z2W8 902 aa16.43■□□□□ 0.22
Trim28-201ENSMUST00000005705 Gm5483B2RV77 97 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Kcnt2D3Z649 1135 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Neu1O35657 409 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Trdmt1O55055 415 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Sephs2P97364 452 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Ubxn2bQ0KL01 331 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Krt26Q3TRJ4 462 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Gm5431Q5NCB3 844 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Ccdc85aQ5SP85 500 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Tmem45aQ60774 273 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Atp2c1Q80XR2 918 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Mettl21cQ8BLU2 248 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Tmem154Q8C4Q9 181 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Nlrp4bQ8C6J9 863 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Erich5Q8K0S2 362 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Irak4Q8R4K2 459 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Sorcs3Q8VI51 1219 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Ppa2Q91VM9 330 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Ndufa10Q99LC3 355 aaKnown RBP16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Dnaaf1Q9D2H9 634 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Rin2Q9D684 903 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 CercamA3KGW5 592 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Gm8113E0CXS8 587 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Hcn3O88705 779 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 EdnrbP48302 442 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 UtyP79457 1212 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Grm5Q3UVX5 1203 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Sel1l3Q80TS8 1137 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Amigo1Q80ZD8 492 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Zswim3Q8CFL8 695 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Tbc1d13Q8R3D1 400 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Lyrm1Q9CQB7 122 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Ttc30bQ9CY00 664 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Arpc5lQ9D898 153 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Ap4s1Q9WVL1 144 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Cib1Q9Z0F4 191 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Spag17Q5S003 2320 aa16.42■□□□□ 0.22
Trim28-201ENSMUST00000005705 Zmynd8A2A484 1235 aaKnown RBP16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Spin2dB1B0R2 236 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Pcsk6F6XJP7 959 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Klc2O88448 599 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 InhbcP55104 352 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Olfr212Q7TS33 327 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Tmem221Q8K071 230 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Il31raQ8K5B1 716 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Tspan33Q8R3S2 283 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 B4galt3Q91YY2 395 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Gtf2ird2Q99NI3 936 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Gm45233A0A0N4SVE0 221 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Tnfrsf14A0A1W2P7D5 276 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Zfp384E9Q1A5 584 aaKnown RBP16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Zbtb10E9Q8X5 861 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 ClppO88696 272 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 RapsnP12672 412 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Tap2P36371 702 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Stt3aP46978 705 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 ThraP63058 492 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Pecam1Q08481 727 aaKnown RBP16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Cgrrf1Q8BMJ7 332 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Nsl1Q8K305 281 aa16.41■□□□□ 0.22
Trim28-201ENSMUST00000005705 Rnf111Q99ML9 989 aa16.41■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 51 ms