RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 RNF149Q8NC42 400 aa13.96□□□□□ -0.17
SCARB2-227ENST00000640957 CNDP1Q96KN2 507 aa13.96□□□□□ -0.17
SCARB2-227ENST00000640957 SLX1AQ9BQ83 275 aa13.96□□□□□ -0.17
SCARB2-227ENST00000640957 DGCR6LQ9BY27 220 aa13.96□□□□□ -0.17
SCARB2-227ENST00000640957 ZNF408Q9H9D4 720 aa13.96□□□□□ -0.17
SCARB2-227ENST00000640957 ASNSD1Q9NWL6 643 aa13.96□□□□□ -0.17
SCARB2-227ENST00000640957 PCDHB12Q9Y5F1 795 aa13.96□□□□□ -0.17
SCARB2-227ENST00000640957 SLX4Q8IY92 1834 aa13.96□□□□□ -0.17
SCARB2-227ENST00000640957 TCAF2A6NFQ2 919 aa13.96□□□□□ -0.17
SCARB2-227ENST00000640957 G3V2L1 256 aa13.96□□□□□ -0.17
SCARB2-227ENST00000640957 HCRTO43612 131 aa13.96□□□□□ -0.17
SCARB2-227ENST00000640957 TRIM13O60858 407 aa13.96□□□□□ -0.17
SCARB2-227ENST00000640957 YWHAEP62258 255 aaKnown RBP13.96□□□□□ -0.17
SCARB2-227ENST00000640957 POU5F1BQ06416 359 aa13.96□□□□□ -0.17
SCARB2-227ENST00000640957 TFDP2Q14188 446 aa13.96□□□□□ -0.17
SCARB2-227ENST00000640957 DALRD3Q5D0E6 543 aaKnown RBP13.96□□□□□ -0.17
SCARB2-227ENST00000640957 MAML3Q96JK9 1138 aa13.96□□□□□ -0.17
SCARB2-227ENST00000640957 NMRAL1Q9HBL8 299 aa13.96□□□□□ -0.17
SCARB2-227ENST00000640957 PNPLA8Q9NP80 782 aa13.96□□□□□ -0.17
SCARB2-227ENST00000640957 DUS2Q9NX74 493 aaKnown RBP13.96□□□□□ -0.17
SCARB2-227ENST00000640957 ARHGAP28Q9P2N2 729 aa13.96□□□□□ -0.17
SCARB2-227ENST00000640957 SBF2Q86WG5 1849 aa13.96□□□□□ -0.17
SCARB2-227ENST00000640957 PGK2P07205 417 aa13.96□□□□□ -0.18
SCARB2-227ENST00000640957 MATN1P21941 496 aa13.96□□□□□ -0.18
SCARB2-227ENST00000640957 GLDCP23378 1020 aa13.96□□□□□ -0.18
SCARB2-227ENST00000640957 ELK4P28324 431 aa13.96□□□□□ -0.18
SCARB2-227ENST00000640957 ZNF132P52740 706 aa13.96□□□□□ -0.18
SCARB2-227ENST00000640957 PDCD4Q53EL6 469 aaKnown RBP13.96□□□□□ -0.18
SCARB2-227ENST00000640957 RNF19BQ6ZMZ0 732 aa13.96□□□□□ -0.18
SCARB2-227ENST00000640957 CYP4V2Q6ZWL3 525 aaPredicted RBP13.96□□□□□ -0.18
SCARB2-227ENST00000640957 CARM1Q86X55 608 aa13.96□□□□□ -0.18
SCARB2-227ENST00000640957 CATSPER1Q8NEC5 780 aa13.96□□□□□ -0.18
SCARB2-227ENST00000640957 MAGEE2Q8TD90 523 aaPredicted RBP13.96□□□□□ -0.18
SCARB2-227ENST00000640957 SPON1Q9HCB6 807 aa13.96□□□□□ -0.18
SCARB2-227ENST00000640957 IGSF9Q9P2J2 1179 aa13.96□□□□□ -0.18
SCARB2-227ENST00000640957 B4GALT5O43286 388 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 GPD1P21695 349 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 POLR2IP36954 125 aaKnown RBP13.95□□□□□ -0.18
SCARB2-227ENST00000640957 PPARGP37231 505 aaPredicted RBP13.95□□□□□ -0.18
SCARB2-227ENST00000640957 CASP2P42575 452 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 IREB2P48200 963 aaKnown RBP13.95□□□□□ -0.18
SCARB2-227ENST00000640957 SERPINB9P50453 376 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 SLC7A2P52569 658 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 TGFB2P61812 414 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 SF3B4Q15427 424 aaKnown RBP eCLIP13.95□□□□□ -0.18
SCARB2-227ENST00000640957 DSG4Q86SJ6 1040 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 IARS2Q9NSE4 1012 aaKnown RBP13.95□□□□□ -0.18
SCARB2-227ENST00000640957 ANKEF1Q9NU02 776 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 MTMR10Q9NXD2 777 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 PLK2Q9NYY3 685 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 MOCS1Q9NZB8 636 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 BCAP29Q9UHQ4 241 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 C9IYK1 514 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 CFAP99D6REC4 459 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 GRID2O43424 1007 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 HARS2P49590 506 aaKnown RBP13.95□□□□□ -0.18
SCARB2-227ENST00000640957 CERCAMQ5T4B2 595 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 ZNF772Q68DY9 489 aaPredicted RBP13.95□□□□□ -0.18
SCARB2-227ENST00000640957 CROCCP3Q8IVE0 287 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 PGAM4Q8N0Y7 254 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 SIX6OS1Q8N1H7 587 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 GGA3Q9NZ52 723 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 RUVBL2Q9Y230 463 aaKnown RBP13.95□□□□□ -0.18
SCARB2-227ENST00000640957 CDYLQ9Y232 598 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 KRBA1A5PL33 1030 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 MATN2O00339 956 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 HDAC3O15379 428 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 XYLBO75191 536 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 CXCL8P10145 99 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 MTHFD1P11586 935 aaKnown RBP13.95□□□□□ -0.18
SCARB2-227ENST00000640957 NCK1P16333 377 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 GOT1P17174 413 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 PTPN7P35236 360 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 ASPAP45381 313 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 RPL14P50914 215 aaKnown RBP13.95□□□□□ -0.18
SCARB2-227ENST00000640957 PLIN5Q00G26 463 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 FBXO48Q5FWF7 155 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 ZFP1Q6P2D0 407 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 VSIG10LQ86VR7 867 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 FAM131BQ86XD5 332 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 NT5DC4Q86YG4 428 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 ZNF280CQ8ND82 737 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 IRGQQ8WZA9 623 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 LPAR1Q92633 364 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 BORCS5Q969J3 196 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 VPS50Q96JG6 964 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 FRMD8Q9BZ67 464 aaPredicted RBP13.95□□□□□ -0.18
SCARB2-227ENST00000640957 ELOVL4Q9GZR5 314 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 ADNPQ9H2P0 1102 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 STN1Q9H668 368 aaKnown RBP13.95□□□□□ -0.18
SCARB2-227ENST00000640957 SNX9Q9Y5X1 595 aa13.95□□□□□ -0.18
SCARB2-227ENST00000640957 YWHAQP27348 245 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 TNK2Q07912 1038 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 RGS21Q2M5E4 152 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 TBCELQ5QJ74 424 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 ANKRD26P1Q6NSI1 321 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 NIPA2Q8N8Q9 360 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 RP9Q8TA86 221 aaKnown RBP13.94□□□□□ -0.18
SCARB2-227ENST00000640957 EXT2Q93063 718 aa13.94□□□□□ -0.18
SCARB2-227ENST00000640957 SEPHS2Q99611 448 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms