RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 CLCN6P51797 869 aa12.41□□□□□ -0.42
CACNA1A-250ENST00000637809 DAB2P98082 770 aa12.41□□□□□ -0.42
CACNA1A-250ENST00000637809 ARSIQ5FYB1 569 aa12.41□□□□□ -0.42
CACNA1A-250ENST00000637809 BRMS1LQ5PSV4 323 aa12.41□□□□□ -0.42
CACNA1A-250ENST00000637809 SMYD5Q6GMV2 418 aa12.41□□□□□ -0.42
CACNA1A-250ENST00000637809 C22orf39Q6P5X5 142 aa12.41□□□□□ -0.42
CACNA1A-250ENST00000637809 ERN2Q76MJ5 926 aaKnown RBP12.41□□□□□ -0.42
CACNA1A-250ENST00000637809 TMC6Q7Z403 805 aa12.41□□□□□ -0.42
CACNA1A-250ENST00000637809 SETD3Q86TU7 594 aaPredicted RBP12.41□□□□□ -0.42
CACNA1A-250ENST00000637809 IRF2BP1Q8IU81 584 aa12.41□□□□□ -0.42
CACNA1A-250ENST00000637809 FAM181AQ8N9Y4 354 aa12.41□□□□□ -0.42
CACNA1A-250ENST00000637809 PGAP3Q96FM1 320 aaPredicted RBP12.41□□□□□ -0.42
CACNA1A-250ENST00000637809 IFT43Q96FT9 208 aa12.41□□□□□ -0.42
CACNA1A-250ENST00000637809 BMFQ96LC9 184 aa12.41□□□□□ -0.42
CACNA1A-250ENST00000637809 APOLD1Q96LR9 279 aa12.41□□□□□ -0.42
CACNA1A-250ENST00000637809 CALN1Q9BXU9 219 aa12.41□□□□□ -0.42
CACNA1A-250ENST00000637809 TNKS2Q9H2K2 1166 aa12.41□□□□□ -0.42
CACNA1A-250ENST00000637809 WDCPQ9H6R7 721 aa12.41□□□□□ -0.42
CACNA1A-250ENST00000637809 SIX2Q9NPC8 291 aa12.41□□□□□ -0.42
CACNA1A-250ENST00000637809 TMPRSS4Q9NRS4 437 aa12.41□□□□□ -0.42
CACNA1A-250ENST00000637809 NLGN3Q9NZ94 848 aa12.41□□□□□ -0.42
CACNA1A-250ENST00000637809 ZNF212Q9UDV6 495 aa12.41□□□□□ -0.42
CACNA1A-250ENST00000637809 FARP1Q9Y4F1 1045 aaPredicted RBP12.41□□□□□ -0.42
CACNA1A-250ENST00000637809 TP53BP1Q12888 1972 aaPredicted RBP12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 K7ESM1 405 aa12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 SCAMP1O15126 338 aa12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 RAD51BO15315 384 aa12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 LZTS3O60299 673 aaPredicted RBP12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 LEFTY1O75610 366 aa12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 ZMPSTE24O75844 475 aa12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 DXOO77932 396 aaKnown RBP12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 MPOP05164 745 aa12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 GP1BAP07359 652 aa12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 CLCN1P35523 988 aa12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 CCDC15Q0P6D6 951 aa12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 FZD2Q14332 565 aa12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 EXOC3L4Q17RC7 722 aa12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 ZNF542PQ5EBM4 170 aa12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 GBP6Q6ZN66 633 aa12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 DPY19L3Q6ZPD9 716 aa12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 Q6ZSR6 202 aa12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 TFAP2DQ7Z6R9 452 aa12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 SLC47A2Q86VL8 602 aa12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 GRIN3AQ8TCU5 1115 aa12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 C1orf74Q96LT6 269 aa12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 CCDC114Q96M63 670 aa12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 ZNF578Q96N58 590 aaPredicted RBP12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 PLCB1Q9NQ66 1216 aa12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 RRN3Q9NYV6 651 aa12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 MPP6Q9NZW5 540 aa12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 IL36AQ9UHA7 158 aa12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 WASF2Q9Y6W5 498 aa12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 NYNRINQ9P2P1 1898 aaKnown RBP12.4□□□□□ -0.42
CACNA1A-250ENST00000637809 A0A1W2PNU3 283 aaPredicted RBP12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 GTPBP10A4D1E9 387 aaKnown RBP12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 POM121BA6NF01 834 aa12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 A6NNZ2 444 aa12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 FOXN3O00409 490 aaPredicted RBP12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 NEBLO76041 1014 aa12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 ENDOD1O94919 500 aa12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 PCDH8O95206 1070 aa12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 FGFR1OPO95684 399 aaKnown RBP12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 PNMA6AP0CW24 399 aaPredicted RBP12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 PLA2G2AP14555 144 aa12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 KRT9P35527 623 aa12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 CXADRP78310 365 aa12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 GABREP78334 506 aa12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 PTK2Q05397 1052 aa12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 HS1BP3Q53T59 392 aa12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 DPY19L2P1Q6NXN4 242 aa12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 KYAT3Q6YP21 454 aaKnown RBP12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 BNIPLQ7Z465 357 aa12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 ZDHHC17Q8IUH5 632 aa12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 ZNF248Q8NDW4 579 aa12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 OR7D4Q8NG98 312 aa12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 VOPP1Q96AW1 172 aa12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 DEPDC7Q96QD5 511 aa12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 TBCBQ99426 244 aa12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 LGMNQ99538 433 aa12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 ASCL3Q9NQ33 180 aa12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 DYRK4Q9NR20 520 aa12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 KLF15Q9UIH9 416 aa12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 RWDD2AQ9UIY3 292 aa12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 FADS3Q9Y5Q0 445 aa12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 HS3ST3A1Q9Y663 406 aa12.39□□□□□ -0.43
CACNA1A-250ENST00000637809 SPTY2D1-AS1A0A0U1RR47 76 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 ILVBLA1L0T0 632 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 NEMP2A6NFY4 417 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 GADD45BO75293 160 aaPredicted RBP12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 USP12O75317 370 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 CSO75390 466 aaKnown RBP12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 CD160O95971 181 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 PAK4O96013 591 aaPredicted RBP12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 CSF2P04141 144 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 ALPPL2P10696 532 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 ADRB3P13945 408 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 NME1P15531 152 aaKnown RBP12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 ITGB7P26010 798 aa12.38□□□□□ -0.43
CACNA1A-250ENST00000637809 OR1E1P30953 314 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms