RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 AGAP14A8MT82 685 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 LGALS16A8MUM7 142 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 ADM5C9JUS6 153 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 GTPBP1O00178 669 aaKnown RBP3.1□□□□□ -1.91
PSPC1-208ENST00000635562 RAB27BO00194 218 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 CD3EAPO15446 510 aaKnown RBP3.1□□□□□ -1.91
PSPC1-208ENST00000635562 GJB3O75712 270 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 FAM155BO75949 473 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 BEST1O76090 585 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 CAMTA2O94983 1202 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 SPDEFO95238 335 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 SMC2O95347 1197 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 SCGB1D1O95968 90 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 ITGA5P08648 1049 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 CSH1P0DML2 217 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 CSH2P0DML3 217 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 EGR2P11161 476 aaPredicted RBP3.1□□□□□ -1.91
PSPC1-208ENST00000635562 CAPN2P17655 700 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 IL10P22301 178 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 KCNA5P22460 613 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 TBXAS1P24557 533 aaPredicted RBP3.1□□□□□ -1.91
PSPC1-208ENST00000635562 DDX6P26196 483 aaKnown RBP eCLIP3.1□□□□□ -1.91
PSPC1-208ENST00000635562 ADSSP30520 456 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 RFC4P35249 363 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 RFC1P35251 1148 aaPredicted RBP3.1□□□□□ -1.91
PSPC1-208ENST00000635562 NNMTP40261 264 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 EPS15P42566 896 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 PTDSS1P48651 473 aaKnown RBP3.1□□□□□ -1.91
PSPC1-208ENST00000635562 CCR5P51681 352 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 HNRNPMP52272 730 aaKnown RBP eCLIP3.1□□□□□ -1.91
PSPC1-208ENST00000635562 PPP5CP53041 499 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 TIAL1Q01085 375 aaKnown RBP eCLIP3.1□□□□□ -1.91
PSPC1-208ENST00000635562 CREB5Q02930 508 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 YWHAHQ04917 246 aaPredicted RBP3.1□□□□□ -1.91
PSPC1-208ENST00000635562 FPGSQ05932 587 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 DEUP1Q05D60 604 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 DDR1Q08345 913 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 GRSF1Q12849 480 aaKnown RBP eCLIP3.1□□□□□ -1.91
PSPC1-208ENST00000635562 COASYQ13057 564 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 TUBB3Q13509 450 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 CUL2Q13617 745 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 MXD4Q14582 209 aaPredicted RBP3.1□□□□□ -1.91
PSPC1-208ENST00000635562 MORF4L2Q15014 288 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 DLGAP5Q15398 846 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 RAB30Q15771 203 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 INAQ16352 499 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 ZSCAN26Q16670 478 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 KYNUQ16719 465 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 TMEM266Q2M3C6 531 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 SLC5A9Q2M3M2 681 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 PTCHD3Q3KNS1 767 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 BOLA3Q53S33 107 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 XKR9Q5GH70 373 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 KCNT1Q5JUK3 1230 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 RBM20Q5T481 1227 aaKnown RBP3.1□□□□□ -1.91
PSPC1-208ENST00000635562 SLC9C2Q5TAH2 1124 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 MANEALQ5VSG8 457 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 ABHD17BQ5VST6 288 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 AADACL4Q5VUY2 407 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 RAP1GAP2Q684P5 730 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 SLC2A7Q6PXP3 512 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 MEX3BQ6ZN04 569 aaKnown RBP3.1□□□□□ -1.91
PSPC1-208ENST00000635562 USP49Q70CQ1 688 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 BNIPLQ7Z465 357 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 GPR149Q86SP6 731 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 SPATA24Q86W54 205 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 RAB11FIP4Q86YS3 637 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 LNX2Q8N448 690 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 PDCL2Q8N4E4 241 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 Q8NFD4 153 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 OR56B2PQ8NGI1 322 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 STT3BQ8TCJ2 826 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 GRK7Q8WTQ7 553 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 TEKT4Q8WW24 435 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 SLC5A11Q8WWX8 675 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 LINC00476Q8WZB0 136 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 ST8SIA4Q92187 359 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 SNX19Q92543 992 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 ATP6V0A1Q93050 837 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 CAVIN3Q969G5 261 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 LRRC59Q96AG4 307 aaKnown RBP3.1□□□□□ -1.91
PSPC1-208ENST00000635562 TMEM125Q96AQ2 219 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 TUBGCP3Q96CW5 907 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 RNF31Q96EP0 1072 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 LRRC46Q96FV0 321 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 VPS50Q96JG6 964 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 TXN2Q99757 166 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 SH3GL1Q99961 368 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 SPXQ9BT56 116 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 TBCDQ9BTW9 1192 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 MAGEB5Q9BZ81 275 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 ZCWPW1Q9H0M4 648 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 TSPYL1Q9H0U9 437 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 THAP9Q9H5L6 903 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 COPS7BQ9H9Q2 264 aaPredicted RBP3.1□□□□□ -1.91
PSPC1-208ENST00000635562 MID1IP1Q9NPA3 183 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 OBP2BQ9NPH6 170 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 HEYLQ9NQ87 328 aaPredicted RBP3.1□□□□□ -1.91
PSPC1-208ENST00000635562 HOMER3Q9NSC5 361 aa3.1□□□□□ -1.91
PSPC1-208ENST00000635562 INTS13Q9NVM9 706 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms